| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4414 |
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| Symbol | |
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| ID | 4313308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1350888 |
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| End bp | 1351637 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638152255 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_776300 |
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| Protein GI | 115359162 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0262262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCTCG ACAACAAGAC CATCATCGTG ACCGGCGCGG CGTCGCCGCG CGGCATCGGC
AAGGCCACCG CCCGCGCGCT CGCCGCCCAC GGCGCGCGCA TTGCGATTCT CGACCTTCGT
CGCGAAGACG CCGAGGCGGC TGCCGCCGAT CTCGGGACGG GCCATCTCGG GCTGGCTTGC
GACGTGACCG ATCGCGATGC ATGCGTGGCC GCGGCCCGCG CGACGCTGGA GCGCTATGGG
CGTATCGACG GCCTCGTGAA CAACGCCGGC ATCACGCAGC CCGTGCGCAC GCTGGACATC
TCCGGGCGCG ACTTCGATGC GATCGTCGAC GTGAACCTGC GCGGCACGCT GTACATGTCG
CAAGCGGTGC TGCCCGCGAT GAAGGAGCAG CGAGGCGGCA GCATCGTCTG CATGTCGTCG
GTGTCCGCGC AGCGCGGCGG CGGCATCTTC GGCGGGCCGC ACTACAGCGC CGCCAAGGCC
GGCGTGCTCG GTCTCGCGAA GGCGATGGCA CGTGAATTCG GCGCCGACCA TATCCGCATC
AATTCGATCA CGCCGGGTCT GATCCAGACC GACATCACCG GGGACAAGCT GACGCCGGAA
ATGCGCGAGG AGATCATCAA GGGCATTCCG CTCGGCCGCC TCGGCGATGC CGCCGATGTC
GCCAATGCGT GCCTGTTCCT GCTGAGCGAC CTGTCGAGCT ACCTGACGGG CATCACGCTC
GACGTCAATG GCGGGATGCT GATTCACTGA
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| Protein sequence | MLLDNKTIIV TGAASPRGIG KATARALAAH GARIAILDLR REDAEAAAAD LGTGHLGLAC
DVTDRDACVA AARATLERYG RIDGLVNNAG ITQPVRTLDI SGRDFDAIVD VNLRGTLYMS
QAVLPAMKEQ RGGSIVCMSS VSAQRGGGIF GGPHYSAAKA GVLGLAKAMA REFGADHIRI
NSITPGLIQT DITGDKLTPE MREEIIKGIP LGRLGDAADV ANACLFLLSD LSSYLTGITL
DVNGGMLIH
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