| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4378 |
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| Symbol | |
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| ID | 4313272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1314013 |
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| End bp | 1315551 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638152218 |
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| Product | major facilitator transporter |
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| Protein accession | YP_776264 |
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| Protein GI | 115359126 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0749958 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTAT CCGACACCCG CAGGAATGCG GTCGCGCTCG CGGCCGTCTG TCTCACGTCG
TTGATGTTCG GCCTCGAGAT CTCGAGCGTG CCGGTGATCC TGCCGACGCT CGAACACGTG
CTGCACGGCG ACTTCAACGG CATGCAGTGG ATCATGAACG CGTACACGAT CGCGTGCACG
ACCGTGCTGA TGGCGGCCGG CACGCTCGCC GACCGCTTCG GCCGCAAGCG CGTGTACGTG
ATCGGCACCG TGCTGTTCGG CGCGACGTCG TTGCTGTGCG GGCTCGCGCC GAACGTGCCG
GTGCTCGTCG CGGGCCGGCT GCTGCAGGGC GCGAGCGGCG GCGCGATGCT GATCTGCCAG
ATCGCGGTGC TGTCGCATCA GTTCCGCGAA GGGCGCGAGC GCGGGCGCGC GTTCGGGATC
TGGGGAATCG TGTTCGGGAT CGGTCTGGGC TTCGGGCCGA TTGTCGGCGG CGCGATCGTC
GCGCTGGCGA GCTGGCCGTG GGTGTTTCTC GTCCACGCGC CACTCGCCGC CGTCGCGCTC
GTGCTGATCG GCGGCGCGGT GCGGGAGTCG CGCGATCCGC ATGCGGGCAC GCTCGACGTC
GCGGGTATCG TCACGCTGTC GCTCGCCGTG CTCGGCCTCG CGTTCTATAT CACCCAAAGC
GCGGAGCTGG GGCTCACGAG CGCGGCCGGC CTCGGCGTGC TCGGCGCGAC CGTGCTTGCG
CTGGCGGGCT TCGTCGTCGC GGAGCGCTTG AGCGCGCGGC CGATGTTCGA CTTCTCCGTG
TTCCGGATTC GCGCGTTCAC CGGCGCGATC TTCGGCTCGA TGGGGATGAA CTTCAGTTTC
TGGCCATTCA TGATCTACCT GCCGATCTGG TTCCAGGTCG CGCTTGGGTA CGACAGCGTG
ACGGCCGGCC TCGCGCTGCT CGCGTACACG CTGCCGACGC TGGTCGCGCC GCCGTTCGGC
GAGCGGCTCG CGCTGCGCTA CGGGCCCGGC GTCGTCATTC CGGGCGGCCT GTTCACGATC
GCGGCCGGTT TCGTGCTGAT GCGGATCGGC AGCGGCGTCG ACCCTGCGAG CTGGCTCACG
ATGCTGCCCG GCTGCGTGAT CGCCGGCATC GGGCTCGGGC TCACCAACAC GCCGGTCACG
AACACGACGA CGGGCGCGGT GCCGGGTTCG CGGGCCGGGA TGGCGTCCGG CATCGACATG
AGCGCGCGGA TGATCTCGCT CGCGCTGAAT ATCGCGGCGA TGGGCTTCGT GCTGGTCGCG
GGGATCGTCG CGAGCCTGAA GGCGGGCGTC GCGGGGGCAA TCGATGCGGG GGCGTTGCGC
ACGCTGGCGC AGCAGATCGC GTCGGGCCGC ACCGACGGGT TGCAGGCGAT CGCGCCGGCG
CTCGCGCAGG CCGACCCGAC CGGCACGGCG CTGCACGCGG CGCTCGTGCA CGGGTTCGGC
TGGGTGATGG TGTATGGCGC GGCCGGCGTG GCCGTGCTCG CGACCGCGAG CGCGGTGGCG
TTCGCGCCGG TGGGGCGGAG GGGGGCGGTG TGTGAATGA
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| Protein sequence | MTLSDTRRNA VALAAVCLTS LMFGLEISSV PVILPTLEHV LHGDFNGMQW IMNAYTIACT
TVLMAAGTLA DRFGRKRVYV IGTVLFGATS LLCGLAPNVP VLVAGRLLQG ASGGAMLICQ
IAVLSHQFRE GRERGRAFGI WGIVFGIGLG FGPIVGGAIV ALASWPWVFL VHAPLAAVAL
VLIGGAVRES RDPHAGTLDV AGIVTLSLAV LGLAFYITQS AELGLTSAAG LGVLGATVLA
LAGFVVAERL SARPMFDFSV FRIRAFTGAI FGSMGMNFSF WPFMIYLPIW FQVALGYDSV
TAGLALLAYT LPTLVAPPFG ERLALRYGPG VVIPGGLFTI AAGFVLMRIG SGVDPASWLT
MLPGCVIAGI GLGLTNTPVT NTTTGAVPGS RAGMASGIDM SARMISLALN IAAMGFVLVA
GIVASLKAGV AGAIDAGALR TLAQQIASGR TDGLQAIAPA LAQADPTGTA LHAALVHGFG
WVMVYGAAGV AVLATASAVA FAPVGRRGAV CE
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