Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4354 |
Symbol | |
ID | 4313248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1281342 |
End bp | 1282202 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638152194 |
Product | RpiR family transcriptional regulator |
Protein accession | YP_776240 |
Protein GI | 115359102 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.339513 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000424592 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCTGCCA ATTTCGATGA ACTCGCGTCC CGTATCCGGG CGCAATTTTC CGAACTGAGC CCGCAATTCC AGGCGGGCGC TGCATTTTTG CTCGATCATC CCGACGAGGT CGCCACCTCG TCGATGCGCA AGGTCGCGCA GCGCGCGCAG GTTCAACCCG CGTCGCTCGT GCGGCTCGCG CAGCAATTCG GTTTCCCCGG CTGGAACGAG CTGCGCGACC TGTGCGTCGC GCGCGTGCGC ACGCGTCCCG AGCCGCTCAC GCAGCGTGCG CGTTCGCTCG TGCGGCCCGA CGCGAAGGCG TCGCTCGCGC ATGACCTGCT GGCCGCCCAG CAACACAATC TCGCCGCCAC CGCCGCGCAG AACGAACACG CGCTCGCCGA CGCGGCGAAG CTGATCCGCA AGGCGTCGCA CGTGCACGTC GCCGGCTTCC GGTCGTGCTA TCCGGTCGCG TTCGGTTTCG TGTACGGCTA TCGGCTGTTC CGGCCGACCG TGTCGCTGCT CAACGGCGTC GCCGGCTCGC TCGAGATGGA GTTGCGCACG ATCGCGAAGC AGAGCGTGAC CGTGATCGTC AGTTTCGCGC CGTATTCGGC GGAAGCGACG CGCGTGGCGC AGGCGGCGAA GGCGCAGGGC AGCAAGATCG TCGCGATCAC CGACAGCGCG GTGTCGCCGA TCGCGCTGCA TGCCGACGCG CAGCTGATCT TCACGCACGA CAGCCCGTCG TTCTTTCCGT CGCTGGTCGC CGCGCACGCG ATGACCGAAG CGCTGGTCGC GCAGTTGCTC GCGCTCGAAG GCAGCGATGC GGTCGCGGCG CTCGAGCGCA CTGAAGCGGA ACTGCATGCG AAGGGCGCGT ATGTCGTGTA G
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Protein sequence | MAANFDELAS RIRAQFSELS PQFQAGAAFL LDHPDEVATS SMRKVAQRAQ VQPASLVRLA QQFGFPGWNE LRDLCVARVR TRPEPLTQRA RSLVRPDAKA SLAHDLLAAQ QHNLAATAAQ NEHALADAAK LIRKASHVHV AGFRSCYPVA FGFVYGYRLF RPTVSLLNGV AGSLEMELRT IAKQSVTVIV SFAPYSAEAT RVAQAAKAQG SKIVAITDSA VSPIALHADA QLIFTHDSPS FFPSLVAAHA MTEALVAQLL ALEGSDAVAA LERTEAELHA KGAYVV
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