| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4294 |
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| Symbol | |
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| ID | 4313189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1217923 |
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| End bp | 1218762 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638152135 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_776181 |
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| Protein GI | 115359043 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.144254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACTC ACGTGCCGCG TTTCGCACCC TACATGTCGA CGCCGGAAAT CGTATGGCAT
TACGCACTGC GATCGGCAAA CGTCGTGGTG CTACTGTTCT TGATTTTGCC GATCCTGGCG
ATCATTCCGC TTTCGTTCAA CGAGAACTCA TTTCTCGTCT ATCCGATACA CGGATTCTCG
TTCAGGTGGT ATCACAATCT GTTCACGTCC ACGGACTGGG CGCGCGCCGG CGCAAACAGT
TTCATCGTGA CGCCGATCGC GACGATCGTT GCGACCGTCC TGGGAACGCT GGCGGCATTG
GGATTGAACA AGGCGTCGTT CAGGGGCAAG GGTTTGCTGG TCGCGATCCT GATCTCGCCG
ATGATCGTCC CGGTCATCGT CACCGGTGTC GGGATGTACC TGCTGTTTGC ACGATGGGGA
CTGGCTGGAA CGTATACCGG CCTGATATTC GGGCATACGG TGATCGCCGC GCCGTTCGTC
GTGATCACGG TCAATGCGAC GCTTGCCGGC TTCAACCAGA ACTATGTGCG AGCGAGCCTG
AGCCTGGGGG CATCGCCGGT GCGAACATTC TTTGCCGTTA CGTTGCCGAT CATTGCGCCA
GGGGTGATTT CCGGTGCGCT GTTTGCGTTC GCTACATCGC TGGACGACGT CGTGATCACG
ATGTTCATCG CCGGTCCGAC GCAGGGAACG CTTCCGCTTC AGATGTTCAT CGGGATTCGC
GAAAACATTA CGCCCACGGT CGCTGCGCTC GCGTCCATTT TCATCGTCTT CTCAAGTCTG
CTGCTGATCA CCATGGAATG GCTGCGTTCC CGATCCGTCG CGAGGCAGGC GTCGACCTGA
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| Protein sequence | MKTHVPRFAP YMSTPEIVWH YALRSANVVV LLFLILPILA IIPLSFNENS FLVYPIHGFS
FRWYHNLFTS TDWARAGANS FIVTPIATIV ATVLGTLAAL GLNKASFRGK GLLVAILISP
MIVPVIVTGV GMYLLFARWG LAGTYTGLIF GHTVIAAPFV VITVNATLAG FNQNYVRASL
SLGASPVRTF FAVTLPIIAP GVISGALFAF ATSLDDVVIT MFIAGPTQGT LPLQMFIGIR
ENITPTVAAL ASIFIVFSSL LLITMEWLRS RSVARQAST
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