Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4286 |
Symbol | |
ID | 4313181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1209640 |
End bp | 1210419 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638152127 |
Product | extracellular solute-binding protein |
Protein accession | YP_776173 |
Protein GI | 115359035 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0413144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGC TGCTTCAGTC GCTGTGCGTG GGCGCGGCAT TGCTCGGATC GGTCGCGCAT GCCGAGCAGG TCGTGCGGGT CGGCACGCTC GCCGATTACG CGCCGTTCGA ATACAAGGAT GCATCAGGCA AGCTGCAGGG CATGGAGATC GATATCGGCA AGAAGATGTG CGACACGATG AAGGTCAAGT GCCAGTGGGT GACGATGGAT TTCGACGCGC TGATTCCGGC ACTCAAGGCG AAGCAGATCG ATGCGGTGCT CGCGCAAATG TCGAAGACGC CGGAGCGTGA GCAGTCGGTG GACTTCACGC GCATCTTCAC GACGGCGCCC GTGCAGTTCG TCGCGAAGCA GGGCTCGGGC GTCACGGACA ACGCCGCCAC GCTGCGCGGC AAGACGATCG GCGTTCAGAC GGCGTCGACG CACGAATCCT ATCTGCGCCG CCGCCTGCCG GCGAGCAAGT CGGGGATCAA CGTGAAGGTC TATCAGACGC TCGACGAAGC CTGGCTCGAT CTCGAGGCCG GACGCGTCGA TGCGGTGTTT GCCGACAACA CGGTCGCGTA CGACTGGCTG ACGAAGGCCG GCAGGAAGGA AGGCTTCGAC TTCGTCGGCA AGCCGATCGC CGATGCGGAG ATCTTCGGCG ACGGTACGGC GATCGCGGTA CGCAAGGGCG ACGCGCCGCT GAAGGCGCTG TTCGACAAAG GCATCGCGCA GGTGCAGGCG GATGGCACGT TCGCCGCAGC CAACAAGCGC TATTTCCCGT TCAGCATCGC GCCGCAATAA
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Protein sequence | MKKLLQSLCV GAALLGSVAH AEQVVRVGTL ADYAPFEYKD ASGKLQGMEI DIGKKMCDTM KVKCQWVTMD FDALIPALKA KQIDAVLAQM SKTPEREQSV DFTRIFTTAP VQFVAKQGSG VTDNAATLRG KTIGVQTAST HESYLRRRLP ASKSGINVKV YQTLDEAWLD LEAGRVDAVF ADNTVAYDWL TKAGRKEGFD FVGKPIADAE IFGDGTAIAV RKGDAPLKAL FDKGIAQVQA DGTFAAANKR YFPFSIAPQ
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