Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4258 |
Symbol | |
ID | 4313153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1182596 |
End bp | 1183042 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638152099 |
Product | lysozyme |
Protein accession | YP_776145 |
Protein GI | 115359007 |
COG category | [R] General function prediction only |
COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00805915 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGAACC AGCCTGAACG TACCGGTGCG CAGGGCATCG CGCTGATCAA GCAGTTCGAG GGGCTGCGCC TCGCTCGCTA TCTCGACGCG GTCGGCAAGC CGACGATCGG CTACGGGCAC CTGATCCTGC CGAACGAGCG CTTCACGCGC CCGCTCACGC CCGCCGAAGC GGAGGCGCTG CTGCGCCGCG ACCTGCGCGG CGCCGAGCTG AACCTGCGCA AGCTGCTGCA TGTGCCGGTC ACGCAGCAGC AGTTCGACGC GCTGATGTCG TTCGTCTTCA ATCTCGGCGC GGGGCGGCTG CGCTCGTCGA CGCTGCTGCG CTACCTGAAC GCCGGCGCGC GCACGCGTGC GGCCGACCAG TTCCTCGTCT GGAACAAGGC CGGCGGCAAG CCGCTCGCGG GGCTCACGAA GCGCCGCCAG GCCGAGCGCG CGCTGTTTCT GTCATGA
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Protein sequence | MANQPERTGA QGIALIKQFE GLRLARYLDA VGKPTIGYGH LILPNERFTR PLTPAEAEAL LRRDLRGAEL NLRKLLHVPV TQQQFDALMS FVFNLGAGRL RSSTLLRYLN AGARTRAADQ FLVWNKAGGK PLAGLTKRRQ AERALFLS
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