Gene Bamb_4258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4258 
Symbol 
ID4313153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1182596 
End bp1183042 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content70% 
IMG OID638152099 
Productlysozyme 
Protein accessionYP_776145 
Protein GI115359007 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00805915 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGAACC AGCCTGAACG TACCGGTGCG CAGGGCATCG CGCTGATCAA GCAGTTCGAG 
GGGCTGCGCC TCGCTCGCTA TCTCGACGCG GTCGGCAAGC CGACGATCGG CTACGGGCAC
CTGATCCTGC CGAACGAGCG CTTCACGCGC CCGCTCACGC CCGCCGAAGC GGAGGCGCTG
CTGCGCCGCG ACCTGCGCGG CGCCGAGCTG AACCTGCGCA AGCTGCTGCA TGTGCCGGTC
ACGCAGCAGC AGTTCGACGC GCTGATGTCG TTCGTCTTCA ATCTCGGCGC GGGGCGGCTG
CGCTCGTCGA CGCTGCTGCG CTACCTGAAC GCCGGCGCGC GCACGCGTGC GGCCGACCAG
TTCCTCGTCT GGAACAAGGC CGGCGGCAAG CCGCTCGCGG GGCTCACGAA GCGCCGCCAG
GCCGAGCGCG CGCTGTTTCT GTCATGA
 
Protein sequence
MANQPERTGA QGIALIKQFE GLRLARYLDA VGKPTIGYGH LILPNERFTR PLTPAEAEAL 
LRRDLRGAEL NLRKLLHVPV TQQQFDALMS FVFNLGAGRL RSSTLLRYLN AGARTRAADQ
FLVWNKAGGK PLAGLTKRRQ AERALFLS