Gene Bamb_4253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4253 
Symbol 
ID4313148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1178599 
End bp1178943 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content68% 
IMG OID638152094 
Producthypothetical protein 
Protein accessionYP_776140 
Protein GI115359002 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.25043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00313283 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGGACATCG TGCAACTTCG ACTCACCACC GGCAGTGACT ACCAGGACGA TCTCGCGGCG 
CTCCGCGACA CGATCCGTCG GAACGGCACG CGCGCGACGC GGCATGCCGT CGACCTCGTG
ATCGATGACG ACGCCGGCGC GCCGCGCGTG TCGCTGCTGC TGAACCTCGC ATGGCAAGCC
GCGAAGAACA GCAAAGTCGT CGTGTTCGCG GTCGACCGCA CGCGAACGCG CTGGCAGCGC
GTCGCCGAAG CGCCGTGCGT GCGTTACCTG TCGAGCTCGG ATCGCGAACG CGTCGCAATC
CACGCGTTCG ACGTGGACGT GCCGGGCGCG GACGGTACAC CGTGA
 
Protein sequence
MDIVQLRLTT GSDYQDDLAA LRDTIRRNGT RATRHAVDLV IDDDAGAPRV SLLLNLAWQA 
AKNSKVVVFA VDRTRTRWQR VAEAPCVRYL SSSDRERVAI HAFDVDVPGA DGTP