Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4191 |
Symbol | |
ID | 4313086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1110953 |
End bp | 1111708 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638152032 |
Product | Sel1 domain-containing protein |
Protein accession | YP_776078 |
Protein GI | 115358940 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCCG TCTCGCTGAA GGCGCTCGCG TCGGTGTCGC CGCGCGCGTT CGCCGACATC CTGGCCGGGC CGCCCGAGCG CGCCGCCGCG TGGGTCGCGG CGGCGGCCGA GCACGGGATC GTCGACGCGC AGGCCGTCTA CGGACAGTAT CTGCTCGACG GACACGGCGT CGCGCGCGAT CCGGCCGCCG CGTTCGGCTG GTTCGGGCAT GCGGCGCGGG CCGGCCATCC GATGGCGATG AACATGCTCG GACGCTGCTA CGAGTTCGGC TGGGGCACGG CCGCGTGCGC GCCGGTGGCC GTGTACTGGT ACCGGCTCGC CGCTCAGGCG GGCCTCGACT GGGGCATGTA CAACTACGCG ACGGCGCTCG CGCTCGGCAA CGGCATCGAC GAGAACCGCG CCGATGCGCT CGACTGGTTT CGCCGCGCGG CCGCGCTCGG CCATGCGAAG TCGATCAACC TGATCGGCGG TTTCTACGAG GACGGCTGGG TCGTTCCCGC CGATGTCGAC ACCGCGTTCG ATCACTATCG CCGCGCCGCC GAGGCCGGCG ACTTCCGCGG CCAGTTCAAC TATGCGCGGC TGCTCGCCGA GCGCGGGCGC ATCGACGAAG CGCTTGCATG GCTCGCGCGC GTGCCGGCCA CCGCTACGCC GGCCTTCGTC GCGAAGATGC GTGCATATCT TGCGTCGTCG CCGCTCGCTG CATTGCGCGC AGCGGCGCTG CGGCTGCCGT CTCACGGCAT GGAATTCGAA TCATGA
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Protein sequence | MEAVSLKALA SVSPRAFADI LAGPPERAAA WVAAAAEHGI VDAQAVYGQY LLDGHGVARD PAAAFGWFGH AARAGHPMAM NMLGRCYEFG WGTAACAPVA VYWYRLAAQA GLDWGMYNYA TALALGNGID ENRADALDWF RRAAALGHAK SINLIGGFYE DGWVVPADVD TAFDHYRRAA EAGDFRGQFN YARLLAERGR IDEALAWLAR VPATATPAFV AKMRAYLASS PLAALRAAAL RLPSHGMEFE S
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