| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4181 |
|---|
| Symbol | |
|---|
| ID | 4313076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 1101207 |
|---|
| End bp | 1102016 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638152022 |
|---|
| Product | 3-ketoacyl-(acyl-carrier-protein) reductase |
|---|
| Protein accession | YP_776068 |
|---|
| Protein GI | 115358930 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.220701 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCG TGCCGGGCAG CGGCCGCCTG CGTGCTGATT TCAGCGGCCG CGTCGTGCTG
GTCACGGGCG CCGCGCAGGG GATCGGCGCC GCGATCGCGC GTCGTTTCAC GCAATCCGGT
GCGTTCGTCG CGCTCGCCGA TCTCAACGCC GATGCGGCTG CCGCGCAGGC GGACGCGCTC
GTCGGCGCGG GCGGCAAGGC GCGCGCGTAT CGCGTCGACG CCGCGAGTCG CGACGAACTC
GGCGCACTCG TCGCGGCGGT CGAATGCGAT GGCGGCCGGC TCGACGTCGT CGTTCACAAC
GCCGCTTATT TTCCGCTCAT GCCGTTTGCG CAGATCGACG AGCCGACGCT CGCGCGGACG
CTGTCGGTCA ACCTGTCGGC GCTGTTCTGG CTCGCGCAGG CCGCGCTGCC GGCATTCGAG
CGCGCGGGGG CGGGGCGGCT GCTCGTCACG TCGTCGGTCA CCGGGCCGCG CGTCGTCTAT
CCGGGGCTCG CGCACTACGC GGCGTCGAAG GCCGGCGTGA ACGGCTTCAT CCGCGCGGCG
GCGCTCGAAC TCGCGCGCCG CAACGTGACG GTCAATGGCG TCGAGCCGGG AATGATCCGC
ACGCCGGCGG CCGGCAATCT CGGCGATGCG TCGGTCGCCG AGCAGATCGC GCGCGACATT
CCGCTCGCGC GGATGGGCGA GCCGGAGGAC ATCGCGAACG CGATGCTGTT TCTCGCGTCG
GCCGACGCGG CGTACATCAC CGGGCAGACG ATCGTCGTCG ATGGCGGCGC GACGTTGCCC
GAGAGCGGGG TCGTGCTGGG CGATGCATAA
|
|---|
| Protein sequence | MNAVPGSGRL RADFSGRVVL VTGAAQGIGA AIARRFTQSG AFVALADLNA DAAAAQADAL
VGAGGKARAY RVDAASRDEL GALVAAVECD GGRLDVVVHN AAYFPLMPFA QIDEPTLART
LSVNLSALFW LAQAALPAFE RAGAGRLLVT SSVTGPRVVY PGLAHYAASK AGVNGFIRAA
ALELARRNVT VNGVEPGMIR TPAAGNLGDA SVAEQIARDI PLARMGEPED IANAMLFLAS
ADAAYITGQT IVVDGGATLP ESGVVLGDA
|
|---|
| |