| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4158 |
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| Symbol | |
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| ID | 4313053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1076573 |
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| End bp | 1077913 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638151999 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_776045 |
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| Protein GI | 115358907 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.214678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.791693 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACAATG GCGTTCGCTT CAGGCCGCCC GAAGCGTCGC CCGCGTTGCA CACGTGTGCA
ACGCGAGGCC GACTCGCCAC CACGCCGATC GAGAGAGACC TCATGACCCT GTTGAGCCGC
CTGCGCGCGC TGTCCGTCGC CGTTGCGCTG TCCTTTGCCG CCTCGCACGC CTTCGCGGCG
GATCTCGTCA TCGCGGGCCG CGACGACATC TACGGCAAGG GGCTGGCCGA GGCCGTCGCC
GGCTTCACCA AACTGCATCC GGGCACCGAC ATCGAGCTGC TCAAGCTGCC GAACGCGAAC
CTGTACCAGA AGCTGAAGCT GTCGATGCGC GAAGGTACCG GCACGTACGA CCTCGTGATG
ATGGACGACA CGTGGGCGCC CGAATTCATC GGCAACGGCT GGCTGAAGCC GCTGCCGGCG
TCGCTCGCCG ATGCCGATCT GGTGCCGTCC GCGGTCGCGC TCGGCCGCAA CGCGGCGGGC
GCGCTGTACG CGCTGCCGAT CGTCGGCAAC GTCGAGATGT TCGCTTACCG GAAGGATCTG
CTCGCGAAGT ACAAGCTGCA GCCGCCGCGC AACTGGGACG ACGTGCTGAA GATCGCGCAG
ACCGTGGGCG GTGCGGACAA GAGCGTGTCC GGCGTCGTGT TCCGCGGCAC GAAGGGCAAC
CCGGTCGTGA CGGGTTTCCT GCCGATCCTG TGGGCCTACG GCGGCGACGT GTTCGACCGT
GCCGGCAACG TGACGATCGA TTCGCGCGAG TCGCAGGCCG CGCTGAAGAC CTTCCTCGCG
CTGAAGGCGT CCGCGCCGAA GGACGTCGAC GTGTACGGCG CCGCCGAAGT GCGCGACGCG
CTGCAGCGCG GCACCGCCGC GCAGTCGATC GAAGTGTGGC CGGCGTGGAT TCCGGCGCTC
GACGATCCGA AGCAGTCGCG CGTGGTCGGG CAGATCGCGC TGCAGCCGCC GCCCGGGCAG
ACGGCAGGCC CCGCACCGAT GCTCGGCATC TGGCAGATGG GCATTCCGAA GGATGCGCCG
CACGCGAAGC TCGCGCAGGA TTTCCTGAGC TACCTGAGCT CGCGCGACAC GCAGACGCGC
CTCGCCGGAA TCGGCATTCC GCCGACGCGC CGCAGCGTGT TCGCCGATCC TGCGCTGGTG
CGCCAGTACC GCTGGTATCC CGATCAGCTG AAGGCGCTCG AGGCCGGCCG TGCACGGCCG
CGCGTGAAGG ACTGGCAGCA GGTCGAGAGC ATCCTCGGCG ACCAGCTGCA GCTCGCGCTG
ACCGGGCAGG CCGCACCCGA CGCCGCGCTG CGTCAGGCGC AGCAGAAGAT CGCTCAGGCG
ACGGCCGCGG CCGGCAAGTG A
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| Protein sequence | MNNGVRFRPP EASPALHTCA TRGRLATTPI ERDLMTLLSR LRALSVAVAL SFAASHAFAA
DLVIAGRDDI YGKGLAEAVA GFTKLHPGTD IELLKLPNAN LYQKLKLSMR EGTGTYDLVM
MDDTWAPEFI GNGWLKPLPA SLADADLVPS AVALGRNAAG ALYALPIVGN VEMFAYRKDL
LAKYKLQPPR NWDDVLKIAQ TVGGADKSVS GVVFRGTKGN PVVTGFLPIL WAYGGDVFDR
AGNVTIDSRE SQAALKTFLA LKASAPKDVD VYGAAEVRDA LQRGTAAQSI EVWPAWIPAL
DDPKQSRVVG QIALQPPPGQ TAGPAPMLGI WQMGIPKDAP HAKLAQDFLS YLSSRDTQTR
LAGIGIPPTR RSVFADPALV RQYRWYPDQL KALEAGRARP RVKDWQQVES ILGDQLQLAL
TGQAAPDAAL RQAQQKIAQA TAAAGK
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