Gene Bamb_4156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4156 
Symbol 
ID4313051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1074812 
End bp1075672 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content69% 
IMG OID638151997 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_776043 
Protein GI115358905 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGC GCCCCGCAGG CATCGCGCAC GCGCGAGCGG GCGCCGCATT CGGTCGCGCG 
GTGCCATGGG GGCTGCGCGT CGTCGCGCTC GCGCTGTTGC TGCTGCCGTG CCTGTGGATG
GCCGGCGCGG CGTTCATGCC GACGCTCGAG CGCCTCGATC ATCCGCTGCG GATCTGGCCG
GCCGCGCCGA CGCTCGAGCA TTTCGTGTCG GTGTGGTCGA ACGGCATCGG CGCGCCGCTC
GCCAATTCGC TGCTGGTCGG GTTCGGCACG ACGCTGCTCG CGCTGACGCT CGCGTTTCCG
GCCGCGTATG CACTCGTGCG GCTGCGGTTT CCGGCGCGGC TCGACCTGCT GTTCCTGATG
CTCGTGCTGG CACTGAAGCT GATGCCGCCG ATCACGATCG CCGTGCCGCT GTTCGCGCTC
GCGAAGCGGC TGCATCTGCT CGACTCGACG CTCGGGCTGA TGCTCGCTTA CCAGATCTAT
GCGCTGCCGA TGGCGATCTG GATGCTGCTC GCGTTCGTGC GCGACGTGCC GGTCGAATAC
GAAGAAGCCG CGTGCATCGA CGGTGCGGGG CTCGCGCGGC GGCTCGTGCA GATCGTGCTG
CCGCTGTGCG CGCCGGGGCT GATCGCGACC GCGATCTTCG TGTTCATCGC CGCGTGGAAC
GAATTCCTGA TCGCGCTGCT GTTCGTGTCG ACGCCGAGCC GCTTCACGCT GCCGCTCGCG
ATTGCCGGTT ACGTGACGGA GAACGGCATC GACTGGGGCG ACCTGATGAG CGCGGGGCTG
CTGGCGTCGC TGCCGACGCT CGCCGTGGCC GGCTACGTGC AGCGCTATCT GCTGCGCGGC
TTCGCCGGCG GGCTGAAATG A
 
Protein sequence
MTARPAGIAH ARAGAAFGRA VPWGLRVVAL ALLLLPCLWM AGAAFMPTLE RLDHPLRIWP 
AAPTLEHFVS VWSNGIGAPL ANSLLVGFGT TLLALTLAFP AAYALVRLRF PARLDLLFLM
LVLALKLMPP ITIAVPLFAL AKRLHLLDST LGLMLAYQIY ALPMAIWMLL AFVRDVPVEY
EEAACIDGAG LARRLVQIVL PLCAPGLIAT AIFVFIAAWN EFLIALLFVS TPSRFTLPLA
IAGYVTENGI DWGDLMSAGL LASLPTLAVA GYVQRYLLRG FAGGLK