Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4107 |
Symbol | |
ID | 4313002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1028524 |
End bp | 1029468 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638151948 |
Product | IclR family transcriptional regulator |
Protein accession | YP_775994 |
Protein GI | 115358856 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.903735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0536886 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGTG CACCGAAATC GCCGGCGAAG CCGGCAAGCG CGCCGCGCGC GACAGCGAGC GACGACGCCG ACCACGACGC GTCGAAGCCG GCCGCGGGCG ACGACGAATC GTCCGGCGGC GCGTCGTCAT ATCTGGTTCC GGGCCTCGAA CGCGGACTGC GGATCCTCGC CGAATTCTCC GCGCGCGAGC CGGTGCTCGG CGCGCCCGAG TTGTCGAAAC GCATCGGTAT CCCGCGCACG ACCACCTTCC GTCTGCTGCA GACGCTCGAA GCGCTCGGCT TTCTCGAGCG CGTGAACGGC GACCGCTATT TCCGGCTCGG TGTCGGCGTG ATGCGGCTCG GCTTCGAATA CCTGAATTCG CTGGAACTGA CCGACCTCGG CGCGCCCGTG CTCGAACGGC TGCGCGACGC GACGGGCCTG TCGACGCACC TGCTGATCCG CGACCAGCGC GATGTCGTGT TCGTCGCGAA GGCACAGAGC AACACGTCGA TGTTCGGTTC GGTGAAGGTG CACGTCGGCA CGCGGCTGCC CGCGCACGCG ACCGTGCACG GCCACGTGCT GATGGGCGAC CTCACGCGCG ACGCGCTGCG TCAGCTGTAT CCGGAAAAGC GGCTCGAGCA GTTCACCGAG CGCACGCCGG GCACCGTCGA CGAGCTGTAT GAGCGCGTGC GTCATTACGC GCGGCTCGGT TATGCGGTGA GCGAAGCCGC GTTCGAGAGC GGCATCTCGG CGGTGACCGC GCCCGTGCGC GACCATTCGG GCGCGATCGT CTCGGCCATC ACGGCGACGG TGCCGCGCTC GGAAATCGGC GAGGCCGGCG AGAAGGAGCG GCTCGTCGAA GCGGTATGCG GCGCGGCGGT CGACCTGTCG CAGCGCCTGA ACTACCGGCC GCTCGAAAGC GACCCGACGT TCGCGCACGC GCGCCATCGG GTCGCGATGT TCTGA
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Protein sequence | MSGAPKSPAK PASAPRATAS DDADHDASKP AAGDDESSGG ASSYLVPGLE RGLRILAEFS AREPVLGAPE LSKRIGIPRT TTFRLLQTLE ALGFLERVNG DRYFRLGVGV MRLGFEYLNS LELTDLGAPV LERLRDATGL STHLLIRDQR DVVFVAKAQS NTSMFGSVKV HVGTRLPAHA TVHGHVLMGD LTRDALRQLY PEKRLEQFTE RTPGTVDELY ERVRHYARLG YAVSEAAFES GISAVTAPVR DHSGAIVSAI TATVPRSEIG EAGEKERLVE AVCGAAVDLS QRLNYRPLES DPTFAHARHR VAMF
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