Gene Bamb_4105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4105 
Symbol 
ID4313000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1026575 
End bp1026892 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content65% 
IMG OID638151946 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_775992 
Protein GI115358854 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.108836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAC AATGGATTTG CGCCGGACAC GCCGGCGCGC TGTCGGAAGA CGCGCCGATC 
GAGTTCAAGC GGACCGACGG CGTCGAAATC GGGATCTACC GCGTCGGCGA CGAGGTGTAT
GCGCTCGAGA ACGTGTGCCC GCATGCGTAC GCGCTGCTGA CGCAGGGCTT CGTCGACGAG
GGCACGGTCG AATGCCCGCT GCACGAGGCC GTGTTCGACA TCAAGACGGG CGAATGCCTG
AAGGGCCCGG GCGGGCGCGC GCTGAAGCAG TACGCGGTGC GCCTGGCCGG CGAGGAAATC
CAGATCAAGG TGGAATGA
 
Protein sequence
MSEQWICAGH AGALSEDAPI EFKRTDGVEI GIYRVGDEVY ALENVCPHAY ALLTQGFVDE 
GTVECPLHEA VFDIKTGECL KGPGGRALKQ YAVRLAGEEI QIKVE