Gene Bamb_4066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4066 
Symbol 
ID4312961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp985077 
End bp986045 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content66% 
IMG OID638151907 
Productagmatinase 
Protein accessionYP_775953 
Protein GI115358815 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 
TIGRFAM ID[TIGR01230] agmatinase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.109687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.399094 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAC TTCTCCACGG CGACGGTGCG ATCCGTCGCA CGACGCCGTA CGGCGCCTCG 
ATCGAAAATA CTTATGCGGG TGTGCTGTCG TTCATGCGCC GCAACTATTC GCGTGCGCTC
GACGGTGTCG ACGTCGCGAT CTCCGGCGTG CCGCTCGATC TCGCGACGAC CTATCGCTCG
GGCGCAAGGC TCGGGCCGGC CGCGATCCGC GCGGCGAGCG TGCAACTCGC GGAGCTCAAT
CCGTATCCGT GGGGCTTCGA TCCGTTCGAC GCTCTCGCGG CCGTCGACTA TGGCGACTGC
TGGTTCGACG CGCACAATCC GCTGTCGATC AAGCCGGCGA TCGTCGAGCA TGCGCGGACG
ATCCTGCGCT CGGGCGCGAA GATGCTGACG CTCGGCGGCG ACCACTACAT CACGTATCCG
CTACTGATCG CGCACGTGGA GCGCTACGGC AAGCCGCTGT CGCTGATTCA TTTCGACGCG
CACTGCGATA CGTGGGCCGA CGACGAACCG GACAGCCTCA ATCACGGCAC GATGTTCTAC
AAGGCCGTGA AGGAAGGGCT GATCGATCCC GCGACGTCGG TGCAGGTTGG GATCCGTACG
TGGAACGACG ACTTTCTCGG GATCGAGCGG CTCGATGCCG CGTGGGTGCA CGACCACGGC
GCGCGTGCGG CGGTCGAGCG GATCGTCGAT ATCGTTGGGG CGCGGCCCGC GTACCTGACG
TTCGACATCG ATTGCCTCGA TCCGGCGTTC GCGCCCGGTA CGGGCACGCC GGTCGCGGGC
GGGTTGTCGT CAGCGCAGGC GCTCGCGATC GTGCGCGGGC TCGGTGCGGT GAACCTGATC
GGGGCGGATG TCGTCGAGGT GGCACCGGCC TACGATCACG CCGACATCAC CGCGATCGCG
GCCGCGCATG TCGCGTGCGA TCTGCTGTGT CTGTGGCGGC AGAAGAAGGT GGCGGGTGCG
TTGAAGTAA
 
Protein sequence
MTELLHGDGA IRRTTPYGAS IENTYAGVLS FMRRNYSRAL DGVDVAISGV PLDLATTYRS 
GARLGPAAIR AASVQLAELN PYPWGFDPFD ALAAVDYGDC WFDAHNPLSI KPAIVEHART
ILRSGAKMLT LGGDHYITYP LLIAHVERYG KPLSLIHFDA HCDTWADDEP DSLNHGTMFY
KAVKEGLIDP ATSVQVGIRT WNDDFLGIER LDAAWVHDHG ARAAVERIVD IVGARPAYLT
FDIDCLDPAF APGTGTPVAG GLSSAQALAI VRGLGAVNLI GADVVEVAPA YDHADITAIA
AAHVACDLLC LWRQKKVAGA LK