Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4062 |
Symbol | |
ID | 4312957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 982383 |
End bp | 983288 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638151903 |
Product | LysR family transcriptional regulator |
Protein accession | YP_775949 |
Protein GI | 115358811 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0198165 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.373928 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAACC TCGACGCGCT CCTGATCTTT GCCCGTGTCG CCGAAATGAC GAGCTTCACG CGGGCGGCCG AAAGCCTGGG CATCCAGAAA GGACGTGTGT CGATGGTGAT CCGCAAGCTC GAGCGCGACG TGGGGGTTGC GCTCCTGCAT CGAACCACGA GGAGCGTGCA GCTCACCGAA GACGGCCGCG CGTTCTATTC CCGCGCCCGC GACCTGCTGG CCGAGGTGCA GGAATTGCAA TCGATGTTCT CGGGTAACGG CACACGGCTG CGCGGAAGGT TGCGCGTCGA CATGCCGACC GAGCTGGCAC GCAGCGTCGT GGTTCCCGCG TTACCGCAAC TGATGGCCGC GCATCCCGAG CTCGAACTGG AACTGTCGAG CACCGATCGG CGCGTCGATC TCGTCCAGGA AGGGTTCGAT TGCGTGATCC GGCTGGGTCC GATCACCGAC GACACGCTGA TTGCCCGCCC GCTGGGCAAG CTGCGGATGA CGAATGCGGC GAGCCCGGGC TATCTGGCAC GGTACGGCAT ACCGCACACG CTCGACGATC TGCGCACCCA GGGGCACCGG ATGGTCCACT ACACGCTGAC GCTCGGCGCC CGGCATCCCG GATGGGAATA TCCGAACGGC GACGGCTATG CGTCGCTGCC GTTGCCCAGC GCGATGCAGG TCAACAGCGT GCAGACCTAT CACGCAGCCG GGCTCGCCGG CATCGGGTTG ATCCAGGCGG GATATTCGGC GCTCGCGCAT CACATTGAAA GCGGCGCGCT GGTCGAGGTT CTGCCCGACC TGCGTCCCGA GCCGCTCGCC GCGTCGCTCG TGGTGGCCCA TCGGCGCAAT CTGTCGCCGC GCGTGCGGGC GTTCATGGAC TGGATCGAAG GCGTCTTGGC GCCCTATCTG GATTAG
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Protein sequence | MQNLDALLIF ARVAEMTSFT RAAESLGIQK GRVSMVIRKL ERDVGVALLH RTTRSVQLTE DGRAFYSRAR DLLAEVQELQ SMFSGNGTRL RGRLRVDMPT ELARSVVVPA LPQLMAAHPE LELELSSTDR RVDLVQEGFD CVIRLGPITD DTLIARPLGK LRMTNAASPG YLARYGIPHT LDDLRTQGHR MVHYTLTLGA RHPGWEYPNG DGYASLPLPS AMQVNSVQTY HAAGLAGIGL IQAGYSALAH HIESGALVEV LPDLRPEPLA ASLVVAHRRN LSPRVRAFMD WIEGVLAPYL D
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