| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4045 |
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| Symbol | |
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| ID | 4312940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 962914 |
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| End bp | 964392 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638151886 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_775932 |
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| Protein GI | 115358794 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCCA GGTCGGCGGC TCCCTATACC ATCGTCGTGG TCGGTATCGT GATCGCCTGC
GCGCTGATGG GTCTGTGCGT GCTGCAGCTG TTCCAGAGCC GCAACGACGC GCGGGAGCGG
GCGAGCGAAA CGTCCCGCAA TCTCGGCCTC ATCGCCGAGC GCGACATCGA ACGCAACTTC
GAACTCTATG ACCTTTCGCT GCAGGCGGTC ATCAACGGCC TCCGACGTTC CGACGTGATG
AATGCGCCCG CGAGCCTGCG GCGCTCCGTG CTGTTCGACA ATGCGATGAC GGCGGAATTT
CTCGGCTCGA TGCTGGTACT CGATGCCGGC GGCAACATCG TGCTGGATTC GGCCAATGAC
GTGCCGCGCC GCGGCAATTT CGCCGACCGT AAATACTTCA CCGTCCATCG TGACAATCCG
AATGCGGGAC TCTTTATCAG CGACCCGTTC ACGTCGCGCC TGCGTGGCGG GGCGCCCAGC
ATCGGGCTCA CGCGGCGAAT CTCGAACCCG GACGGCTCGT TCGGCGGCGT CGTGCTCATC
GCGGTCAACC TCGAGTATTT CCATAATCTG TTTGCCGGCC TGTCGCTGGG GCAGCACGGC
TCGATCTCGC TGATCGGCAG CGACGGCGTC ATGGTGATGC GTCAGCCGTA CGACGCCCAC
ACGATCGGCC GCGATATCAG CCACGCCGCG ACCTTCAAGC GGTTTCAGAC CGCGCGGGAG
GGCGTGTTCT CGGAAACCTC GTCGCTCGAC GGGGTGCGCC GGCTCTACTA CTTCAGGCAT
CTGCCGAAGC TGCCGCTGAT GATCATGGTC GCCGAAGCGG AAGAGGACAT TTATGCGGCG
TGGCGGCACC GGGCCGCGAC GATCGGCGCG TTGGTGGCGA CGTTCGGCGC CGCCTTCATC
GCGGTGTCAG TCATGCTCGG CACGCAACTG CGGCGGCGGA TGCGCGCCGA GTCGGAACTC
GTGTTGCTCG CCCGCACCGA CGGTCTCACC GGGCTGAACA ATCGCCGCAC CTTCGGCGAA
GTGCTGGATC GCGAATGGCG TCGCGCACGG CGCTCGCGCT CGGTTTTCTC GTTGTTGTTC
GTCGATGTCG ATCGCTTCAA GGCCTATAAC GACACCTACG GCCACCAGGC CGGAGACGAC
GCACTGGCCG CGGTTGCGCG CTGCATCGGC GAGAACATCC GCCGGCCCGC CGATACCGCG
GCGCGCTACG GTGGGGAGGA ATTCGTCGTG CTGCTCCCCG ATACGCCCGA GACGGGCGCC
GCCCAGATCG CCGAGCGAAT TCGCGCGGCA ATCGACGAAC TGGCGCTCGA GCACGCGGGC
AGCGAACACG GGCACGTGAC CGCCAGTATC GGCCTCGCGA GCTGGACGCC AGATGACGAC
GTGGAGGCCG GCAGCGTGAT CAAGGCCGCC GACGAGGCGC TGTACTACGC GAAGGCAACG
GGCCGCAACA AGGTCGCCGC GTTTCAGCCG CCGGCGTGA
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| Protein sequence | MQSRSAAPYT IVVVGIVIAC ALMGLCVLQL FQSRNDARER ASETSRNLGL IAERDIERNF
ELYDLSLQAV INGLRRSDVM NAPASLRRSV LFDNAMTAEF LGSMLVLDAG GNIVLDSAND
VPRRGNFADR KYFTVHRDNP NAGLFISDPF TSRLRGGAPS IGLTRRISNP DGSFGGVVLI
AVNLEYFHNL FAGLSLGQHG SISLIGSDGV MVMRQPYDAH TIGRDISHAA TFKRFQTARE
GVFSETSSLD GVRRLYYFRH LPKLPLMIMV AEAEEDIYAA WRHRAATIGA LVATFGAAFI
AVSVMLGTQL RRRMRAESEL VLLARTDGLT GLNNRRTFGE VLDREWRRAR RSRSVFSLLF
VDVDRFKAYN DTYGHQAGDD ALAAVARCIG ENIRRPADTA ARYGGEEFVV LLPDTPETGA
AQIAERIRAA IDELALEHAG SEHGHVTASI GLASWTPDDD VEAGSVIKAA DEALYYAKAT
GRNKVAAFQP PA
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