| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4037 |
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| Symbol | |
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| ID | 4312932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 954107 |
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| End bp | 955261 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638151878 |
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| Product | porin |
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| Protein accession | YP_775924 |
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| Protein GI | 115358786 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.27779 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACC ACGTCATTTT TGCCGCCGCG CTGGCAGCGT TCGCCGCGCC GGCCTTCGCG
CAGGACAGCG TGACGCTGTA CGGCCTGATC GACGAAGGCT TCAACTACAC GAACAACGTG
AATGTGCATG GGGTCGGAAA AACGGATTAC CAGCTCGCGA GCGGCTATGC GCAGGGCAGC
CGCTGGGGCC TGAAGGGCAG CGAGGAACTG GGCGGCGGCC TGAAGGCTAT CTTCACGCTG
GAAAACGGCT TCGACGTGAA CAACGGCCGG TTCAACCAGG GCGGCCGGAT GTTCGGCCGC
CAGGCGTTCG TCGGGCTGAG CGCGTCGCGT TTCGGCACGC TGACCTTCGG TCGCCAGTAC
GATTCCGTCG TCGACTATCT CGCGCCGCTG ACCGCGAACG GCAACTGGGG CGGCACGCTG
TTCTCGCACC CGTTCGACAA CGACAACACG GACAACTCGT TCCGCGTCAA CAACACGGTC
AAGTACGCGA GCCCCGACTG GAACGGGCTG TCGTTCGGCG GCACCTACAG CTTCAGCAAC
AGCACGGGCT TCTCGACCAA CCGCCAGTAC AGCCTCGGCG CGCAGTATTC GCTCGCCGGA
TTGCAGGTCG CGGCCGCGTA CCTGCAGGCG AACAGCCCGG GCGTCGGCAA CGCGGGCGCG
ATCGCGGCCG ACGACGCAAA TTTCGTCGCC GACCGCCTGC GCATCTTCGG TGGCGGCATC
AACTATACGT TCGGCCCGGC GACGGTCGGC TTCGTCTATA CGAAGACCGA CGTGAAGAAC
CCGGTGTCGA CCGTCTACCT GCCGGCGTCG ACGTTCTCGG GCCTCGGGCT GACCGCGACC
AAGTTCCAGA ACTTCGAGAT CAACGGCAAG TACCAGCTCA CGTCCGATTT CTATCTCGGC
GCGCAGTACG TGTACACGGA CGGCAAGTTC GACGCCGCGA CCGGCTCGTT CAAGCCGAAA
TACCACACCG TCGGACTGAT GGCCGACTAC AGCCTGTCCA AGCGCACCGA CGTCTATCTG
CAGGGCGCGT GGCAGAAAGT CGCCGGCGAC AAGACGGGCA CCGCGGCCGA CGGCGGCTAC
GTGGTCGGGA CGGATGGCCC GTCATCGTCG TCGAACCAGT TCGCGGTGCG CGCCGCGATC
CGCCACAAGT TCTGA
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| Protein sequence | MKNHVIFAAA LAAFAAPAFA QDSVTLYGLI DEGFNYTNNV NVHGVGKTDY QLASGYAQGS
RWGLKGSEEL GGGLKAIFTL ENGFDVNNGR FNQGGRMFGR QAFVGLSASR FGTLTFGRQY
DSVVDYLAPL TANGNWGGTL FSHPFDNDNT DNSFRVNNTV KYASPDWNGL SFGGTYSFSN
STGFSTNRQY SLGAQYSLAG LQVAAAYLQA NSPGVGNAGA IAADDANFVA DRLRIFGGGI
NYTFGPATVG FVYTKTDVKN PVSTVYLPAS TFSGLGLTAT KFQNFEINGK YQLTSDFYLG
AQYVYTDGKF DAATGSFKPK YHTVGLMADY SLSKRTDVYL QGAWQKVAGD KTGTAADGGY
VVGTDGPSSS SNQFAVRAAI RHKF
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