Gene Bamb_4000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4000 
Symbol 
ID4312896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp911499 
End bp911954 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content70% 
IMG OID638151842 
ProductMarR family transcriptional regulator 
Protein accessionYP_775888 
Protein GI115358750 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCGTC ACATGACACC ACCCCGCACA CCCGGCGTTT CCGCCGACAC CGTCGCCACC 
GACCTGACCC TCGCGGTCGG CCAGCTGATC CGCCGGCTGC GCTCCGAGAT CGACTCCGAA
GGGCTCGGCA TGTCGCAGAC GAGCGCGCTC GCGCGGCTCG AACGACAGGG CCCGATGACG
ACCGCCGACC TCGCCCGCGC CGAGGCGATG AAGCCGCAGT CGATGAAGGC GATTCTCGCG
AGCCTCGAGG AAGACGGGCT GGTCGAACGC GAGCCGCACC CGACCGACGG CCGCCAGATC
CTATTCCTGC TGACCGCGGC CGGCCGCGAA GCACGGCGCA AGCGCGACAC CGCGAAGCAC
AAGTGGCTCG GCGCCGCGAT CGACAAGCTC GACCCTGAAG AGATCCGCAC ACTCGCCGCC
GCGATTCCGC TGATCCGGCG CATCGGCGAG CAATGA
 
Protein sequence
MLRHMTPPRT PGVSADTVAT DLTLAVGQLI RRLRSEIDSE GLGMSQTSAL ARLERQGPMT 
TADLARAEAM KPQSMKAILA SLEEDGLVER EPHPTDGRQI LFLLTAAGRE ARRKRDTAKH
KWLGAAIDKL DPEEIRTLAA AIPLIRRIGE Q