| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3942 |
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| Symbol | |
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| ID | 4312838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 837134 |
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| End bp | 837733 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638151784 |
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| Product | uracil-DNA glycosylase superfamily protein |
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| Protein accession | YP_775830 |
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| Protein GI | 115358692 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0738689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAAC GAACGCGCAC GCCGCTCGAC GTGCTGCTCA CTGAAATCCG CGCGTGCCGC
GCCTGCGAAG CCGACCTGCC GCTCGGCCCG CGTCCGGTCG TGCGCGCCCA TCGCGACGCG
CGCATCCTGA TCGTCGGGCA GGCGCCCGGC GCCCGCGTCC ATGCGAGCGG GATCCCGTGG
GACGATGCGA GCGGCAAGCG GCTGCGCGAC TGGCTGGGCG TCGACGCCGA CACCTTCTAC
GACGAGACGC GCTTCGCGAT CGTGCCGATG GGCTTCTGCT ATCCGGGCCG CGGCGCGAGC
GGCGACAACC CGCCGCGCCC CGAATGCGCG CCACTGTGGA TCGACCGGCT GCTCGCCGAA
CTGCCGTCGA TCCGGCTGAC GCTGCTGATC GGCCAGTACG CGCAGCGGCA TTTCCTGCGC
GACACGCGCA AGGCGACGCT GACCGACACC GTGCAGGCGT GGCGCGACTA CGGCCCCGAC
GTGCTGCCGC TGCCGCATCC GTCGCCGCGC AACCAGGCGT GGTTCAAGCA TCATCCGTGG
TTCGACGCCG AGGTCGTGCC CGAGCTGCGC CGGCGCGTCG CGCCGCTGGT GGCGGGCTGA
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| Protein sequence | MPKRTRTPLD VLLTEIRACR ACEADLPLGP RPVVRAHRDA RILIVGQAPG ARVHASGIPW
DDASGKRLRD WLGVDADTFY DETRFAIVPM GFCYPGRGAS GDNPPRPECA PLWIDRLLAE
LPSIRLTLLI GQYAQRHFLR DTRKATLTDT VQAWRDYGPD VLPLPHPSPR NQAWFKHHPW
FDAEVVPELR RRVAPLVAG
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