| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3936 |
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| Symbol | |
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| ID | 4312832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 829760 |
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| End bp | 832363 |
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| Gene Length | 2604 bp |
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| Protein Length | 867 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638151778 |
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| Product | nitrite reductase (NAD(P)H), large subunit |
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| Protein accession | YP_775824 |
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| Protein GI | 115358686 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00309412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA TCGTCATCGG CCACGGAATG GTCGGCCACA AGCTCCTCGA ATGCGTCGCG
GCGCAAGCCG GCGCGGCGGA TGCGCTGCAG GTCACGGTGC TCGGCGAGGA GCCGCGCCCG
GCATACGACC GCGTGCACCT GTCGGAATTC TTCGCGGGCA AGTCGGTGGA CGACCTGTCG
CTCGTCGAGC CCGGCTTCTT CGAACGCCAT CCGCAGTTCG ACCTGCGCCT GAACGCGTGC
GTCGCGTCGA TCGACCGCGC CGCGCACACG GTCACGCTCG CGTCGGGCGA GACGCTCGCG
TACGACAAGC TGGTGCTCGC GACGGGCTCG CGTCCGTTCG TGCCGCCGGT GCCGGGCCGC
GACCGCCCGG GCTGCTTCGT GTACCGGACG ATCGAGGATC TCGAGGCGAT GCAGGCGTGC
GGCGCGCACG CGAAGCGTGG CGTGGTGATC GGCGGCGGGC TGCTCGGCCT CGAATGCGCG
AAGGCGCTGC GCGACATGGG GCTCGAGACG CACGTCGTCG AATTCGCGCC GCGACTGATG
GCCGTGCAGG TCGACGACGG CGGCGGCCGG ATGCTGCGCG CGAAGATCGA GGCGCTCGGC
GTGACCGTGC ATACGGGCAA GAACACGCTC GAGATCGTCG ACGGTGAAGA AGGTACCCAT
CGGATGGCGT TCGCCGACGG CTCGCATCTC GACACCGACA TGATCGTGTT CTCGGCCGGC
ATCCGCGCGC GCGACGAACT GGCACGCGCG TGCGGCCTGG AGATCGGCCC GCGCGGCGGC
GTCGCGATCG ACGACGCGTG CCGCACGAGC GACGCCGACA TCTACGCGAT CGGCGAATGC
GCGGCCTGGA ACGGCATGGT GTACGGCCTC GTCGCGCCGG GCTACGACAT GGCGCGCGTG
GTCGCGAAGC AGCTCGCGGG TGACGCTGAC GAAGCGGCCG CATTCGCCGG CGCCGACATG
AGCACGAAGC TCAAGCTGAT GGGCGTCGAC GTCGCGAGCA TCGGCGACGC GCACGGCACG
ACGGCCGGCA GCTGCACCTA CCAGTATGCG GACGAGCGTC GCCAGGTCTA CAAGAAGCTG
GTGGTGTCGG ATTGCGGCAA GTTCCTGCAT GGCGCGGTGA TGGTCGGCGA CGCGGCCGAA
TACGGCACGC TGCTGCAGAT GATGCTGAAC CGCATCGAGT TGCCCGAGTC GCCGGAATTC
CTGATCCTGC CGTCATCGGA TGGCGCAGCC AAGCCGGCGA TCGGCGTGGA TGCGCTGCCG
GACGGCGCGC AGATCTGCTC GTGCAACAAC GTGTCGAAGT CGCAGATCTG CGCGGCGGTG
GCCGACGGCG CGACGAGCCT CGGCGCACTG AAATCGTGCA CGGGCGCGGG CACGTCGTGC
GGCGGCTGCG TGCCGCTCGT CACGCAGATC ATGAAGGCCG AGATGAAGAA GCAGGGCCTC
GCGGTCAACA ACCATCTGTG CGAGCACTTC CCGCATTCGC GCCAGGAGCT GTTCCACCTG
ATCCGCGTCG AGCGCATCAC GACCTTCGGC GAACTGCTCG CGAAGCACGG TCGCGGCCTG
GGCTGCGACG TGTGCAAGCC GGCCGTCGCG GGCATCCTCG CGTCGTGCTT CAACGAGTTC
GTGCTGAAGA AGGAGCATGC GGGGCTGCAG GACTCGAACG ACTACTACCT CGCGAACATC
CAGCGCGACG GCACGTACTC GGTCGTGCCG CGCATGCCGG GCGGCGAGGT GACGCCGGAA
GGGCTGATCG CGGTCGGCCA GGTCGCGCGC AAGTACGGCC TCTACACGAA GATCACGGGC
GGCCAGCGCG TCGACCTGTT CGGCGCGCGC GTCGAGCAGT TGCCGTCGAT CTGGGAAGAG
CTGATTGCCG CCGGCTTCGA ATCGGGGCAT GCGTACGGCA AGTCGGTGCG CACCGTGAAG
TCGTGCGTCG GCTCGACGTG GTGCCGCTAC GGCGTCGACG ATTCGGTCGG CCTCGCGATC
GACATCGAGA ACCGCTACAA GGGCTTGCGC GCGCCGCACA AGATCAAGTT CGGCGTGTCG
GGCTGCACGC GCGAGTGCGC GGAAGCGCAG GGCAAGGACA TCGGGATCAT CGCGACCGAG
AAGGGCTGGA ACCTGTACGT GTGCGGCAAC GGCGGGATGA AGCCGCGCCA CGCGGAACTG
ATCGCGTCCG ACCTCGACCG TGCCACGCTG ATCCGCTACA TCGACCGCTT CCTGATGTTC
TACGTGCGCA CCGCCGACCG GCTGCAGCGC ACCAGCGTGT GGCGCGACAA CCTCGAAGGC
GGGCTCGACT ACCTGACCGA CGTCGTCGTG CACGACAAGC TCGGCATCGC GGCCGAACTC
GAGGCCGACA TGCAGCACGT GGTCGACACC TACGAATGCG AATGGAAGAA GGCCGTCACC
GATCCGGAAA CGCGCAAACG CTTCCGCCAC TTCGTGAACA GCGACGCGCC CGACGCGACC
ATCGCATTCG TGGAGACGCG CGGCCAGATC CGTCCCGCGA CGCCCGACGA GCGCGTGGGC
GGCAGGCCCG TCCGGATTCC CGTTGTCGCC GAAGCGGCCA CGGAGTCCGC AACTGAATCT
GCAACCGAAT CGGCAACCGT TTGA
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| Protein sequence | MKLIVIGHGM VGHKLLECVA AQAGAADALQ VTVLGEEPRP AYDRVHLSEF FAGKSVDDLS
LVEPGFFERH PQFDLRLNAC VASIDRAAHT VTLASGETLA YDKLVLATGS RPFVPPVPGR
DRPGCFVYRT IEDLEAMQAC GAHAKRGVVI GGGLLGLECA KALRDMGLET HVVEFAPRLM
AVQVDDGGGR MLRAKIEALG VTVHTGKNTL EIVDGEEGTH RMAFADGSHL DTDMIVFSAG
IRARDELARA CGLEIGPRGG VAIDDACRTS DADIYAIGEC AAWNGMVYGL VAPGYDMARV
VAKQLAGDAD EAAAFAGADM STKLKLMGVD VASIGDAHGT TAGSCTYQYA DERRQVYKKL
VVSDCGKFLH GAVMVGDAAE YGTLLQMMLN RIELPESPEF LILPSSDGAA KPAIGVDALP
DGAQICSCNN VSKSQICAAV ADGATSLGAL KSCTGAGTSC GGCVPLVTQI MKAEMKKQGL
AVNNHLCEHF PHSRQELFHL IRVERITTFG ELLAKHGRGL GCDVCKPAVA GILASCFNEF
VLKKEHAGLQ DSNDYYLANI QRDGTYSVVP RMPGGEVTPE GLIAVGQVAR KYGLYTKITG
GQRVDLFGAR VEQLPSIWEE LIAAGFESGH AYGKSVRTVK SCVGSTWCRY GVDDSVGLAI
DIENRYKGLR APHKIKFGVS GCTRECAEAQ GKDIGIIATE KGWNLYVCGN GGMKPRHAEL
IASDLDRATL IRYIDRFLMF YVRTADRLQR TSVWRDNLEG GLDYLTDVVV HDKLGIAAEL
EADMQHVVDT YECEWKKAVT DPETRKRFRH FVNSDAPDAT IAFVETRGQI RPATPDERVG
GRPVRIPVVA EAATESATES ATESATV
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