| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3834 |
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| Symbol | |
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| ID | 4312730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 705783 |
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| End bp | 707393 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638151676 |
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| Product | YadA domain-containing protein |
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| Protein accession | YP_775722 |
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| Protein GI | 115358584 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.466914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.508963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCGG CTGGCATCCC GCTCAAATTG CGGGTTTCGC TGGCGGCGGT AACGGCGCTG
ATGCTGCTGC CTGTGGGGCG GGCATACGCA GATAACCTGG CAGTCGGTGG CCAGAACGGT
GGTATCAACG AGACGATCGG CGGTGCTGCG GCGGCACCCC CGGCGACCAC GGGGGGAACG
TATCCCGCAG TTGCCGGTGC CGATGGTTCG AGCCAGAACA CTGCAGTCGG CGTCTTTGTG
TCGGCGCAGG GCGGGGCGGC AACGGCATTG GGCGATACGG TTACGGCAAA TGGCCGGAAT
GCGACGGCGG TCGGCTCTAA TTCGGTGGCC AACGGCACCA GGGCAGTGGC GTACGGCGGC
GGGTCGAGCG CAGCGAATGG CGACTCGACT GCGATTGGTG CGCTGGCACA TACTACTTCG
GAGTTCTCAA CGGCGGTCGG TACTAATAGT TCAGCCGCTG GCGGAACGGC GGTGGGTTTT
CAGGCGAGCG CGAACGCGTC TGACGCGACC GCAATCGGTG TGGATTCTGT CGCATCCGGG
ATCGGCAGCG TTTCAATTTC CCGCGCACAG GCCACTGCCC AGAACGCGAT CGCGATTGGC
GAAAATGCTT CCGCGGCCGA TGCAAATTCC GTGGCATTGG GCTCCGGCGC AGTGACGCGC
GCGTTTACCA CGGTCAGCAG CGCGACGCTG AACGGCGTCA ACTACAGCGG CTTCGCGGGC
ACACCCGTCG GCGTGGTGAG CGTGGGCAGC GCAGGCGCCG AACGCCAGAT CGTGAATGTC
GCCGCCGGTG AAATCAGCGC AACGAGTACG GACGCGGTCA ACGGCTCACA GCTTTTCGCT
GTCGCAAGTC AAGTTTCCGT TCTCTCGAAT AACCTTACGT CTCTCACAGC GAAGGTCGAC
ACAATTTCCA CTTCCGGTTC GAATGGCACG GTTGCAGACC AAACCGGCAC CGCGGTAGGG
AACAATTCGC TCGTGTCTGT CCCCAACGGG ACCGCTGTGG GCAACGGCGC AAACGTTTCG
GGTCAAGATG GCACGGCAAT CGGAACCAAC TCGACTGTTA CGGCTGATCG CGCAACTGCC
ATTGGCTCGG GTTCCAAGGT GACAGGCACG AACGGAACCG CAATCGGTGA CGGTTCGAAC
GTCACGGGCA CGAACGGGAC TGCAATTGGC GCAAACTCCC GAGTGACCGC GAACAATTCG
GTTGCCCTGG GTGCTAATTC AATTGCAGAC AGGGACAACA CGGTTTCGGT CGGCGCGCCG
GGAGCCGAGC GTCAGATTAC CAACGTTGCA GACGGTACGG CTCCGACCGA TGCCGTGAAC
GTACGCCAGT TCAACAGCGC AGTTAACAGC GTTCGGGACG ACCTCCAAAA GTATCGCAAG
GATTCGAACG CCGGTTCGGC TTCGGCCGTC GCGCTGTCGA TGCTCCCGCA AGCACCTGCG
CCCGGTAAGT CGGTCGTCGG CGTGGCGGTT GGCAATTACG CTGGTCAGAC GGGTTTCGCT
GTCGGTGTGT CGACTTATCT GCCTGGCGGT AGCTGGATTT TCAAAGGCGG TGGCTCGACA
AACACCCGCG GTACGGTGGC TGTTGGGGGT AGCGCCGGGT ATGTTTGGTA A
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| Protein sequence | MTAAGIPLKL RVSLAAVTAL MLLPVGRAYA DNLAVGGQNG GINETIGGAA AAPPATTGGT
YPAVAGADGS SQNTAVGVFV SAQGGAATAL GDTVTANGRN ATAVGSNSVA NGTRAVAYGG
GSSAANGDST AIGALAHTTS EFSTAVGTNS SAAGGTAVGF QASANASDAT AIGVDSVASG
IGSVSISRAQ ATAQNAIAIG ENASAADANS VALGSGAVTR AFTTVSSATL NGVNYSGFAG
TPVGVVSVGS AGAERQIVNV AAGEISATST DAVNGSQLFA VASQVSVLSN NLTSLTAKVD
TISTSGSNGT VADQTGTAVG NNSLVSVPNG TAVGNGANVS GQDGTAIGTN STVTADRATA
IGSGSKVTGT NGTAIGDGSN VTGTNGTAIG ANSRVTANNS VALGANSIAD RDNTVSVGAP
GAERQITNVA DGTAPTDAVN VRQFNSAVNS VRDDLQKYRK DSNAGSASAV ALSMLPQAPA
PGKSVVGVAV GNYAGQTGFA VGVSTYLPGG SWIFKGGGST NTRGTVAVGG SAGYVW
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