Gene Bamb_3825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3825 
Symbol 
ID4312721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp694960 
End bp696018 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content68% 
IMG OID638151667 
Productalcohol dehydrogenase 
Protein accessionYP_775713 
Protein GI115358575 
COG category[R] General function prediction only 
COG ID[COG2130] Putative NADP-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.48899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAAA CCAAGACAGC AAACCGCAGA ATCGTCCTGA ACGCGCGTCC GGTCGGCGCA 
CCCACCCCGA ACGACTTTCG CACCGAGACC GCCGACGTGC CGGTGCCCCG CGCCGGACAG
GTGCTGTTGC GCACGGTCTG GCTGTCGCTC GATCCGTACA TGCGCGGGCG CATGAGCGAC
GCGCCGTCGT ATGCGCCGCC GGTCGAACTC GGCGACGTGA TGGTCGGCGG CACGGTCAGC
CGCGTCGTCG CATCGAACCT GCCCGCGTAT CGCGAAGGCG ACCTGGTCGT CGCGGGCGCG
GGCTGGCAGG ACTACGCGTT GTCCGACGGC AGCGATCTCA TTGCGCTCGG CCGCGACTTC
GCGCATCCGT CGTATGCACT CGGCGTGCTC GGCATGCCGG GGTTCACCGC GTACACCGGA
TTGCTGAAGA TCGGCGAGCC GAAGGCCGGA GAAACCGTGG TCGTCGCCGC CGCGAGCGGG
GCGGTCGGGT CGGTGGTCGG CCAGATCGCG AAGCTGAAGG GCTGCCGCGT GGTCGGCGTC
GCGGGCGGCG CCGACAAGGT CGCGTACGTG AAGGACACGC TCGGCTTCGA CGCGTGCATC
GATCATCGCG ATCCGCAGTT TGCGGCCAAG CTGAAGGACG CCTGTCCGAA CGGCATCGAC
GTCTATTTCG AGAACGTCGG CGGCGCCGTG TTCGACGCGG TGTGGCCGCT GCTCAACGAT
CATGCGCGCG TGCCGGTGTG CGGCATCATC GCGCATTACA ACGACGCGGC GTACGACGAC
ACCGCGGTGT CGAGCGGCCG TGACCGCGTG CCGGCGCTGA TGGGCACCAT CCTGCGCAAG
CGCATCCGGA TGCAGGGCTT CATCATTCTC GATCATTATG CGACGGGCTA TGCGCCATTC
CTGAAGGAGA TGAGCGAGTG GGTCGCGCAG GGCAAGGTGA AGACGCTCGA GGACGTGATC
CCCGATCTCG CCGATGCGCC GAATGCGCTG ATCGGCTTGC TCGCCGGCAA GAACTTCGGC
AAGGTCGTCG TGCGCGTCGG CCCGGACGAA CTGGCCTGA
 
Protein sequence
MPQTKTANRR IVLNARPVGA PTPNDFRTET ADVPVPRAGQ VLLRTVWLSL DPYMRGRMSD 
APSYAPPVEL GDVMVGGTVS RVVASNLPAY REGDLVVAGA GWQDYALSDG SDLIALGRDF
AHPSYALGVL GMPGFTAYTG LLKIGEPKAG ETVVVAAASG AVGSVVGQIA KLKGCRVVGV
AGGADKVAYV KDTLGFDACI DHRDPQFAAK LKDACPNGID VYFENVGGAV FDAVWPLLND
HARVPVCGII AHYNDAAYDD TAVSSGRDRV PALMGTILRK RIRMQGFIIL DHYATGYAPF
LKEMSEWVAQ GKVKTLEDVI PDLADAPNAL IGLLAGKNFG KVVVRVGPDE LA