Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3790 |
Symbol | |
ID | 4312686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 658724 |
End bp | 660523 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638151632 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_775678 |
Protein GI | 115358540 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.178746 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTCGT CCATCCGGAC CCGTATTCTT GCCGCGTGCG TCGCCATCGT CGTCTTCGCG CTCGTCGCCA CCACGCTGAT CAACTATTTC ATCGCGCGCT CGTACAACGA AGACGCGATC GACCGCAACC TGACTTCCGT CGCGAGCGGC CATGTGGTCG GCATCGGCGA CTGGGTCGCG ACCAGGAGCC GGATGATCGC GTCGCTGCAG GACGCCGCGC TGTCGCCGGA TCCGCTGCCG GCGTTCAAGC AGATGGCCGC TGCCGGCGGC TTCACGAACG TGTACGCGGG CTACGCGGAC AAGGTGTTCC ATTTCTCCGA CCCGACCGGC ATCCCGCCCG ACTACGATCC GACCGGCCGC CCGTGGTACA AGCAGGCCGC GCAGGCCGGC AAGCCGGTCG TCACGCCGCC TTACGTCGAC GCGGGTACCG GCAACCTGGT CGTCACGTTC GCGGTGCCGA TCCTGCGCGA CGGCGCGCTG AAGGGCGTCG TCGCGGCCGA TGTCGCGATG GACAGCGTGA TCGCGAACGT GAAGTCGATC CACCCGACGC CCGCGAGCTT CGGGATGCTG ATCGACAGCA ACGGCCACGT CGTCGCGCAT CCCGACGCGA AGCTCACGCT GAAGCCGGTG GCGGATGTAT CGCCCGACCT CGGCGGCATG AGCGCCGCGT CGCTGGCCGC GGCCACCGCG CCGGTCGAAG TGCACGTCGG CGGCGACGCG AAGCTCGCGC GCGCGCAGGC CGTGCCGGGC ACCGACTGGT ATGCGCTGGT GCTGCTCGAC AAGTCGGAAG CGACGGCCGG GATGCGCTCG CTGCTGACCG CGTCGCTGGT CACGCTGGTC GTGATCGTCG GCGTCGCGTC GCTGATCATC GGCGCGATCA CCACGACCGC ATTCCGCCGC CTGTCGCAGG TGCGTCAGGC GATGGCGTCG ATCGGCTCGG GCACGGGCGA CCTGACGCAG CGCCTGCCGG CCGAAGGCCG CGACGAAGTG GCCGATATCG CGCGCTCGTT CAACAGTTTC GTCGACAAGT TGAACGACGT GATGCGGCAG ATCCGCGACG CGAGCGAATC GGTGCGCACG GCCGCGAACG AAATCGCCGC GGGCAACCAG GACCTGTCGT CGCGCACCGA ATCGGCGGCG GCGAGCCTCG AGGAAACAGC GGCGTCGATG GAAGAGATCA CCGCGACGGT CGGTCAGTCG GCGGCGGCTG CCGGCCAGGC CGACGAACGC GCGGCCGCGG CGTCGCGGAT CGCGTCGCAC GGCGGCGTGG TCGTGTCGGA CGTGGTGGCG ACGATGGGGA AGATCGAGGA AGCGTCGGGC CGGATCGGCG ACATCATCGG CGTGATCGAC GGCATCGCGT TCCAGACCAA CATCCTCGCG CTGAACGCGG CCGTCGAAGC GGCGCGCGCC GGCGAGCAGG GCCGCGGTTT CGCGGTCGTC GCGCAGGAAG TGCGCAGCCT CGCGCAACGC AGCGCGCAAG CCGCGCGCGA AGTGAAGGTG CTGGTCGAGT CGACGGTGGC GAGCGTGTCG GCCGGGTCGG GACAGGTGCG CCAGGCCGGC GATACGATGC GCGAGATCGT GTCGAACGTC GCCAACGTGA CGACGATCAT CTCCGAGATC ACGCACGCAG CGAACGAGCA GACGCGCGGC ATCCAGGAAG TGAATCGCGC GGTCACGCAG CTCGACGAGA TGGTGCAGCA GAACGCGGCG CTCGTCGAAC AGTCGACCGC GGCCGCGACC GCGCTGCAGA CGCAGGCGAA CGCGCTCGCG ACGACGGTCG GGCAGTTCAA GGTCGCGTGA
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Protein sequence | MFSSIRTRIL AACVAIVVFA LVATTLINYF IARSYNEDAI DRNLTSVASG HVVGIGDWVA TRSRMIASLQ DAALSPDPLP AFKQMAAAGG FTNVYAGYAD KVFHFSDPTG IPPDYDPTGR PWYKQAAQAG KPVVTPPYVD AGTGNLVVTF AVPILRDGAL KGVVAADVAM DSVIANVKSI HPTPASFGML IDSNGHVVAH PDAKLTLKPV ADVSPDLGGM SAASLAAATA PVEVHVGGDA KLARAQAVPG TDWYALVLLD KSEATAGMRS LLTASLVTLV VIVGVASLII GAITTTAFRR LSQVRQAMAS IGSGTGDLTQ RLPAEGRDEV ADIARSFNSF VDKLNDVMRQ IRDASESVRT AANEIAAGNQ DLSSRTESAA ASLEETAASM EEITATVGQS AAAAGQADER AAAASRIASH GGVVVSDVVA TMGKIEEASG RIGDIIGVID GIAFQTNILA LNAAVEAARA GEQGRGFAVV AQEVRSLAQR SAQAAREVKV LVESTVASVS AGSGQVRQAG DTMREIVSNV ANVTTIISEI THAANEQTRG IQEVNRAVTQ LDEMVQQNAA LVEQSTAAAT ALQTQANALA TTVGQFKVA
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