Gene Bamb_3755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3755 
Symbol 
ID4312651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp616552 
End bp618225 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content67% 
IMG OID638151597 
Productphospholipase C 
Protein accessionYP_775643 
Protein GI115358505 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3511] Phospholipase C 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.206328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.260447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGTC AAGCCTTGCT CGTCACCGCC TGTGCAGCCG CAGCGCTTGC GCTGTTCGCC 
TGCGGCGGCA GCGACGATCC GACGTCGACG CCCGCGGTGT CGTCGCAGGA TGCACTGCAG
ACCGCCACGC CGATCAAGCA CGTCGTCGTG ATCTACGGCG AAAACGTGTC GTTCGACCAC
TACTTCGGCA CTTACCCGAA CGCGTCGAAC CCGTCCGGCG AACCGGCCTT CACCGCCAAG
CCCGGCACGC CGACGATCAA CGGGCTGACG GGCACGCTGC TGACCGCGAA CCCGAACTTC
ACGAACACGG CCAACGGCAC CGACGCCGCG AACCCGTTCC GCCTCGACCG CACGCAGGCC
GCGACGGCCG ACCAGAACCA CGCGTACACG GCCGAGCAGC AGGCCGAGGA CAACGGCCTC
GCCGACCTGT TCCCGAAATA CACCGGCAAG GGCTCGTCCG GCGGCGCCGG CGCGTTCGGC
ACGAAGGGCC AGGTGATGGG TTACTTCGAC GGCAACACCG TCACCGCGCT GTGGAACTAC
GCACAGCGCT TCGCGATGAG CGACAACGCA TATACGACGG TCTACGGCCC GTCGACGCCG
GGCGCGCTGA ACGTCGTGTC GGGCCAGACC AACGGGATGC AGATCGTCAA GACGTCGAAG
CAGCCGTCGA CGCTCGCGGC CACCTCGTAC TACATCAACG ACGGCCAGGG CGGCTTCACG
ATGATCAACG ACGTCGACCC CGGCTTCGAC GTGTGCTCGA GCACGACCGA CCAGGCGATG
ATGAGCGGCA AGAACATCGG CGACCTGCTG AACGCCGCGA AGATCACGTG GGGCGGCTTC
ATGGGCGGCT TCAACCTGTC GACGACCAAC GGCAACGGCA CGACCGGCTG TAACCGCAGC
ACCGTCGCCA CCGCCGTGAA CGCGGCGACG GCCGACTACA TCCCGCACCA CAACTGGTTT
CAGTACTACG CGTCGACCGC GAACCCGCAG CACACGCGTC CGAGCAGCAT CGCGGCGATC
GGTTCGAGCG TCCAGGCCGA CGGCAAGACG GCCGAGCCGG CGAACCACCA GTACGACAGC
GACGATTTCT TCGCGGCCGT GAAGGCCGGC AATTTCCCGT CGGTCAGCTT CCTCAAGGCG
CCAGCCGCGC AGGATGCGCA CGCGGGCTAC TCGGATCCGC TCGACGAGCA GGCGTTCGTG
ACGAAGGTCG TCAACTTCCT GCAGCAGCAG CCGGACTGGC AGAACACGGC CGTGATCGTC
ACCTATGACG ACTCCGACGG CTGGTACGAC CACGCGTACA CGGCGCCGAC CCACGCGTCG
TCCGATGCGG TCGACCAGGT GAACGGCAAC GGCGCATGCG GCACGGGCGG CACCACCGGC
GTGAACGGCG GCACCGTGAA TGGCAGCTGC GGCCCGGGTG TGCGCATTCC GCTGGTCGTG
ATCTCGCCGT ACGCGAAGCA GAACTATGTC GACCACACGA TGATCGACCA GGCGTCCGTC
GTGCGCTTCA TCGAGGACAA CTGGCTCGGC GGCCAGCGCA TCGGCGGCGG TTCGTTCGAT
GCGACGGCGG GCGACCTGCG CGGGCTGTTC GACTTCGCGT CGAAGCCGAA TACGGCGCCG
CTGTATCTCG ATCCGACGCA AGGCACCGTG CTGAGCGCGG CGCCGTCGAT CTGA
 
Protein sequence
MFRQALLVTA CAAAALALFA CGGSDDPTST PAVSSQDALQ TATPIKHVVV IYGENVSFDH 
YFGTYPNASN PSGEPAFTAK PGTPTINGLT GTLLTANPNF TNTANGTDAA NPFRLDRTQA
ATADQNHAYT AEQQAEDNGL ADLFPKYTGK GSSGGAGAFG TKGQVMGYFD GNTVTALWNY
AQRFAMSDNA YTTVYGPSTP GALNVVSGQT NGMQIVKTSK QPSTLAATSY YINDGQGGFT
MINDVDPGFD VCSSTTDQAM MSGKNIGDLL NAAKITWGGF MGGFNLSTTN GNGTTGCNRS
TVATAVNAAT ADYIPHHNWF QYYASTANPQ HTRPSSIAAI GSSVQADGKT AEPANHQYDS
DDFFAAVKAG NFPSVSFLKA PAAQDAHAGY SDPLDEQAFV TKVVNFLQQQ PDWQNTAVIV
TYDDSDGWYD HAYTAPTHAS SDAVDQVNGN GACGTGGTTG VNGGTVNGSC GPGVRIPLVV
ISPYAKQNYV DHTMIDQASV VRFIEDNWLG GQRIGGGSFD ATAGDLRGLF DFASKPNTAP
LYLDPTQGTV LSAAPSI