| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3742 |
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| Symbol | |
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| ID | 4312638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 601457 |
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| End bp | 602599 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638151584 |
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| Product | porin |
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| Protein accession | YP_775630 |
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| Protein GI | 115358492 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.40751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAA CCCTGATTGC CGCCGCCTCC GCCACCGCAC TCTTCGCCCC GCTCGCGCAC
GCGCAGAGCT CGGTCACGCT GTACGGCCTG ATCGACGCCG GCATCGCGTA CACCAACAAC
GTGAACGGCG GATCCCAGTG GCGGATGACC ACCGGCACGA TCAACGGCAG CCGTTTCGGG
CTGCGCGGCA CCGAGGATCT CGGTGGCGGC CTGAAGGCGC TGTTCGTGCT GGAGAACGGC
TTCAACGCGA ACAACGGCGC GCTTGGCCAG GACGGCAAGC TGTTCGGCCG CCATGCATAC
GTCGGCCTGA GCCGCAGCGG CTTCGGCACG CTGACGCTCG GCCGCCAGTA CGACACGATG
GTCGACTTCG TCGCGCCGCT GTCCGCGACG GCCGGCGACT TCGGCGATAC GGGCTTCGCG
CATCCGTTCG ACAACGACAA CCTGAACCAT TCGGTGCGCA TCAACAACGC GGTCAAGTAC
ACGAGCGACA CGATCGCGGG CTTCAAGGTC GGCGCGCTGT ACGGCTTCTC GAACTCGACG
AACTTCGCCG GCAATCGCGC GTACAGCGTC GCGGCGAGCT ACACGAACGG CCCGCTGAAG
CTGGCCGGCG CGTACCTGCA GATGAACGGC ACGAAGGGTT CGACGAGCGC GAGCCCCGGC
GCGACCGACG TGGCCGAAGC GAAGAGCGTG AGCCAGGGCG GCTGGTCGGT GGGCGCGGAC
CGCATGCGCA CGTACGGTGG CGGTGTCAGC TACGGGTTCG GTCCGGCGAC GGTCGGCTTC
GTCTATACGC GTTCGCAGTA CGACAACTCG GGCTCGTTCG GCTCGACCGG CCAGGTCGCG
TTCAACAACT ACGACGTGAA CGTGCGCTAT GCGGTGACGC CGGCCGTCAG CCTCGGCGCG
GCCTACGTGT ATACGGACGC CAGCGTGTCG AACCCCGACA GCAAGCACGG CACCGATCCG
AAGTGGCACC AGGTCGACCT GCAGGCGGTG TACAAGCTGT CGCGCCGCAC CGATCTGTAC
GCGGAAGCGA TGTACCAGCA CGCATCGGGC CGCGGCTACC AGGCGTTCAT CAACACGTCG
GGCGGCGCAT CGAGCACCGC GAACCAGATC GTCGGCACGA TCGGCATGCG CACGCGCTTC
TGA
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| Protein sequence | MNKTLIAAAS ATALFAPLAH AQSSVTLYGL IDAGIAYTNN VNGGSQWRMT TGTINGSRFG
LRGTEDLGGG LKALFVLENG FNANNGALGQ DGKLFGRHAY VGLSRSGFGT LTLGRQYDTM
VDFVAPLSAT AGDFGDTGFA HPFDNDNLNH SVRINNAVKY TSDTIAGFKV GALYGFSNST
NFAGNRAYSV AASYTNGPLK LAGAYLQMNG TKGSTSASPG ATDVAEAKSV SQGGWSVGAD
RMRTYGGGVS YGFGPATVGF VYTRSQYDNS GSFGSTGQVA FNNYDVNVRY AVTPAVSLGA
AYVYTDASVS NPDSKHGTDP KWHQVDLQAV YKLSRRTDLY AEAMYQHASG RGYQAFINTS
GGASSTANQI VGTIGMRTRF
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