Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3740 |
Symbol | |
ID | 4312636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 599834 |
End bp | 600781 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638151582 |
Product | LysR family transcriptional regulator |
Protein accession | YP_775628 |
Protein GI | 115358490 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.163769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACCC TACAAAACAT GCGGGTGTTT ACGCGCGTCG TCGAGACGGG CAGTTTCACC GCAGCCGCGC AATCGCTGAA TTCGACGACG GGCGCGATGT CGCGCGCGGT GTCGGAGCTC GAGGCGCGCC TGCGCACCCG TCTGATGAAT CGCTCGACGC GCCGTCTCGC GCTGACGTCG GCCGGCGAAA GCTATCTTCG GCGCTGCCGG CAGATCCTCG CCGACGTCGA TCGCGCCGAG GAAGAGGCAA GCTGCGCGCA CGAGCGGCCG GCCGGCGTGC TGCGCATGCA CAGCTTCGCG AGCGTCGGCC ATCACTATGT GATGCCCGCG CTGACGCGCT ATCACACGCA GTATCCCGAC GTGTCGATCG AGTTGTCGCT GTCGCAGCGC ATGCCCGACC TGTTCGATGG CACGAGCGAC ATGGCGGTCG TAACCGCGTC GTCGCTGCCC GATTCGGAAC TCGTGTCGCA CCTGCTCGGC TCGACCTTCA GCATCCTGTG CGCGTCGCCC GAGTACGTGA AGCGCCACGG CGCGCCCGCA CGCCCGCAGG ATCTCGGCGC GCACGCATGC CTGACGCTCT GCACGCCGGC CTTCCCGACT CACGAATGGG TGCTCGAAGG CGCTGAGGGG GTCGAACAGA TCCATGTCGC CGGGCCGGTG CAGACCAATA CGGCCGAGTC GCTCGCGCTC GCGATCCGCG ACGGCATCGG GATCGGCATG CTGCCGCTGT ATTCGGCGAT CGATGCGCTG CGCGACGGCA CGCTCGTGCG CGTGCTGCCC GATCACATCC TGCAGAAGAT GAACGTGTAT GCGCTGTATC CGTCGCGCCG CTTCGTCGAT GCGAAGGTGC GCACCTGGGT CGAGATGCTG CGGGCGCAGG TGCCAGGGAT GATCGCGCGC GACGTCGAGA TGCTGAACGC GATCGATCGC GAACCGCAGG CCGCGTGA
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Protein sequence | MDTLQNMRVF TRVVETGSFT AAAQSLNSTT GAMSRAVSEL EARLRTRLMN RSTRRLALTS AGESYLRRCR QILADVDRAE EEASCAHERP AGVLRMHSFA SVGHHYVMPA LTRYHTQYPD VSIELSLSQR MPDLFDGTSD MAVVTASSLP DSELVSHLLG STFSILCASP EYVKRHGAPA RPQDLGAHAC LTLCTPAFPT HEWVLEGAEG VEQIHVAGPV QTNTAESLAL AIRDGIGIGM LPLYSAIDAL RDGTLVRVLP DHILQKMNVY ALYPSRRFVD AKVRTWVEML RAQVPGMIAR DVEMLNAIDR EPQAA
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