Gene Bamb_3739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3739 
Symbol 
ID4312635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp597462 
End bp599642 
Gene Length2181 bp 
Protein Length726 aa 
Translation table11 
GC content69% 
IMG OID638151581 
Productfusaric acid resistance protein region 
Protein accessionYP_775627 
Protein GI115358489 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.7262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCAC AACCTGCCGA GCGACCTTCC ATCGAACCCG CACGATGGAG CGCCTGGCTC 
GATCCGCTCG GCGGCGCCGC GCGCGATTGG GCCGTGAGCG ACGGGCTGAT CTGGCTGCAC
CTCGCCAAAA CCGTGTTCGC CGCGCTGCTC GCGATGGGCA TCGCGATGCG GCTCGAGATG
TCGCAGCCGC GCACCGCGAT GACGACCGTG TTCGTGCTGA TGCAGCCAAT GTCGGGGATG
GTGTTCGCGA AGAGCTTCTA TCGCGTGCTC GGCACGGCGG CCGGCCTGGT CGCCGCGCTC
GCGCTCGGCG GGCTGTTCGC GCAGCAGCCG GAGCTGTACA TGGCCGGCAT CACGCTGTGG
ATCGGCGCCT GCATCGCGCT CGCGGTGCGC AACCGCCACT TCCGCTGGTA CGGGTTCGTG
CTCGCCGGCT ATACCGCCGC GCTGATCGGC CTGCCGGCGG TGATGACACC GCAGACGCTG
TTCCAGTCCG CGCTCACGCG CGCCGCGGAA GTCGCGCTGG GCATCGCGTG CTCCGGCGCC
GTCAGCGCGC TGATCCTGCC GCTCAGCTCC GCGAAGGCGC TGATGCGCTC GCTGAGCGCC
CGCCACGTGA AGTTCCCGGC CTTCGCGGCC GGCGCGCTGT CGGGCGAGCT CGCGCGCGGT
GATTTCGAGC GGCGCTTCGC CGATTTCGTC GACGAGATCG TCGGCTTCGA GGCCAATCGC
GCGTTCGCGT CGTTCGAGGA TCCGCACATT CGCGCGCGCA GCCGCCGGCT CGCGCGGCTG
AACAGCGAGT TCATGAACGC GTGCACGCGC CTGCATGCGC TGCATCAGCT CGTCAAGCGC
TTGCGCGCGA ACCGCTCGGA CGCCGTGCTC GACGCGCTCG CGCCGCATGT CGACGGGCTC
GCGCGGCACA TCACCGCGTT GCGCGACGAG CGGCAGCGCG GGATCGCGTC GACGACCGGC
GCGCTGCTGG AACTGCGCCG CTTTCACGGC GCGTTGCCGA AGGCTGCCCG CGCGTCGCGC
CGCGCGCTCG AGGATCACGC GGCCGGCGGC CTGCTCGACT TCGATACCGC GATCGAGCTG
ACGTATCGCT TCATCGGCGA GTATGTCGGC TATGCCGACA CGTACGCGTC GCTCGACCGC
GACGATCATG CGTTCGAACG CTCGGTCACG CGCTACGCGG TGAAGACCAA TTCGTTCTTC
GTCGGCTTCG CGTTCCTGCG CACGCTCGTC GCCGTCGGCG CGATGAGCGC GTTCTGGATC
GCGTCCGAAT GGCCGAGCGG CTCGCTCGCC GTGATCGCCA CCGCGATCGC GTGCGCGCTG
AGCTCGACCT CTCCGCGCGC GTCGAAATTC GTCGCGCAGA TGGCCGTCGG CGCGGCGTTC
GCGACGGCGG TCGGCTATGT GTTCCTGTGC TACGTGTATC CGAACATCGA CGGTTTTCCG
CTGCTGTGCG CGGCCCTCGC GCCGGTGCTC GGCCTCGGCG CGTTTCTCGC GATGCGTCCG
GGGCTGTCCG GTTACGGAAT CGGCTTCGCG GTGTTCTTCT GCCTGCTCGC GGGGCCCGAC
AACGCGATCG CGTATACCCC CGAGGTGCTC GTCAACAACG GTTTCGCCGT CGTCATCGCG
ATGCTGGCGT GCTCGATCGT GTTCGCGGTG GTGTTTCCGA CCCACATGCC GTGGCTCACG
TCGCGCATCG CGCACGATCT GCGCCGCCAG GTCACGCTCG CCTGCGAAGG CTCGCGCGAG
GGCCTTGCGG CGCGCTTCCA GTCGAGCACG CACGACCTGA TGGCGCAGCT GCGCACGCTG
CTCGTCAGAC GCACGCGACA GCATCGCGAC GCGCTGCGCT GGATGCTGTC GACGCTCGAA
GTCGGCCACG CGGTGATCGA CCTGCGCGAC GAGCTGCACG GTTTCTGCGA ATCGAAACCG
CCGCAGACGA CGCGCTGGAC CGTGTCGGTC GATGCGGTGC TGCACGAACT GCCGCGCTTC
TTCGACGATC CGACGCCGGT CCACCACGCG CGCACGCTGA AATCCGTGAA CCTGGCGATC
CGCGCCGCGC AGCACACGCT GCATGCGTGG TACGCGGTGC CCGCTGAGCG CCACCGCATG
CAGCGCATCG TCGGCTGCCT GCACTTCATG CGCAGCGCGC TGCTGGACAA GGACGCGCCG
TTCAACCGCC ACCGTCATTG A
 
Protein sequence
MKPQPAERPS IEPARWSAWL DPLGGAARDW AVSDGLIWLH LAKTVFAALL AMGIAMRLEM 
SQPRTAMTTV FVLMQPMSGM VFAKSFYRVL GTAAGLVAAL ALGGLFAQQP ELYMAGITLW
IGACIALAVR NRHFRWYGFV LAGYTAALIG LPAVMTPQTL FQSALTRAAE VALGIACSGA
VSALILPLSS AKALMRSLSA RHVKFPAFAA GALSGELARG DFERRFADFV DEIVGFEANR
AFASFEDPHI RARSRRLARL NSEFMNACTR LHALHQLVKR LRANRSDAVL DALAPHVDGL
ARHITALRDE RQRGIASTTG ALLELRRFHG ALPKAARASR RALEDHAAGG LLDFDTAIEL
TYRFIGEYVG YADTYASLDR DDHAFERSVT RYAVKTNSFF VGFAFLRTLV AVGAMSAFWI
ASEWPSGSLA VIATAIACAL SSTSPRASKF VAQMAVGAAF ATAVGYVFLC YVYPNIDGFP
LLCAALAPVL GLGAFLAMRP GLSGYGIGFA VFFCLLAGPD NAIAYTPEVL VNNGFAVVIA
MLACSIVFAV VFPTHMPWLT SRIAHDLRRQ VTLACEGSRE GLAARFQSST HDLMAQLRTL
LVRRTRQHRD ALRWMLSTLE VGHAVIDLRD ELHGFCESKP PQTTRWTVSV DAVLHELPRF
FDDPTPVHHA RTLKSVNLAI RAAQHTLHAW YAVPAERHRM QRIVGCLHFM RSALLDKDAP
FNRHRH