Gene Bamb_3712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3712 
Symbol 
ID4312608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp568093 
End bp568872 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content69% 
IMG OID638151554 
Productcyclic nucleotide-binding protein 
Protein accessionYP_775600 
Protein GI115358462 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.971291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGACC CTCTCGCTGC GCCGCCCGAC GCGATCGCTA TCTCGGCCAA TCTGCCGGCC 
GACACGCCGG TCGACACGCT GCCCGAACCC GGCCCGTTGC CCGCGCTGTC CGCGCTGTTC
GGCCAGTGCG CGTGGTTCCG CGCACTGGCG CCGGAACACC AGGCGCTCGT GCTCGCGCAG
TCGCGCGCCG AGCAGCGCGA AGCCGGCGAC GTGATCGCGC AGCGGCTCGC GCCGTCCGAG
TACTGGATCG GCGTGCATCG CGGGTTGCTG AAGCTCGCGA TCTTCAACGC GTCGGGCCGC
GGCTGCACGT TTTCCGGCGT GCCGTCGGGC GGCTGGTTCG GCGAAGGCAG CGTGATCAAG
CGCGAGCTGC GCAAGTACGA AGTCGTCGCG GTCCAGCGCT CGACCGTGCT GTTCGTGCCG
GTCGACACGT TCCATGCGCT GCTCGACACG AGCCTGCCGT TCACGCGCTT CGTGATCCAT
CAGCTCAACA ACCGGATGGG CGAATTCATC GCATCGATCC AGAATAGCCG CCTGCTCGAC
GTCGACGCGC GCGTCGCGCA GGCGCTCGCG CAACTGTTCA ACCGCGACCT GTACCCGGAC
ACCGGCCCGT CGCTCGCGAT CTCGCAGGAG GAACTGGGGA TGCTCGTCGG CGTGTCGCGG
CAGCGGATCA ACCAGGCGTT GCAGCAACTC GAGAAGCGCG GCGTGCTGCG GCTCGCGTAC
AACCAGATCG AGGTCGTCGA TCTGGCCGCG CTCGCGCGGG TCGGGATGGA ACAGATCTGA
 
Protein sequence
MHDPLAAPPD AIAISANLPA DTPVDTLPEP GPLPALSALF GQCAWFRALA PEHQALVLAQ 
SRAEQREAGD VIAQRLAPSE YWIGVHRGLL KLAIFNASGR GCTFSGVPSG GWFGEGSVIK
RELRKYEVVA VQRSTVLFVP VDTFHALLDT SLPFTRFVIH QLNNRMGEFI ASIQNSRLLD
VDARVAQALA QLFNRDLYPD TGPSLAISQE ELGMLVGVSR QRINQALQQL EKRGVLRLAY
NQIEVVDLAA LARVGMEQI