| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3694 |
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| Symbol | |
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| ID | 4312590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 544776 |
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| End bp | 546260 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638151536 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_775582 |
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| Protein GI | 115358444 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.385244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCG CGATCCGCAT CGAAGGCCGT CACGACCTGA CCGGGCAAAT CTTCCGGCAG
CTACGCACCG CGATCGTCGA CGGGCGGCTC GAGGGCGGCG CCCGGCTGCC GTCGACGCGC
GATCTCGCGA AGCAGCTCGG CGTGTCGCGC AAGACGACGC TCGATGCGTT CGAGCGTCTC
GTCGCCGAGG GCTACCTGAA CACACGCGCG GGCGACGGCA CGTTCGTCGC CGGCGGCCTT
GCGCGGGTTC CGCATGCGCC GGTCGCGTCG ACACCCTCGC TCGTCGAGGA CACGCCGCGC
GTCCACGCGG TCGACGCCCG TGCGCTGTGG GACGATCTGC CCGACGCGCT GGCGATGCCG
ACACCGCAGG CGTCGCCCGC CTTCGACTTC CGCGGCGGCG TGACCGACAA GACGCTGTTC
CCCTTCGACG CGTGGCGCCG CTGCCTGCAT CACGCATTGC GCCAGCAGGC GCGCGGCCTC
GGCCAGTACC ACGACCCGGC GGGCGACCCG CAATTGCGCG GCGCGATCGC GCGCTACGTC
GGGTTCAGCC GCGCGGTGGC CTGCGGCTGG GACGACGTGC TCGTCACGCA GGGCGCGCAA
CAGGCGCTCG ATCTGATCGC GCGCGTGGTT GTGCGGCCGG GCGACGTCGT CGCGGTCGAG
AATCCCGGCT ATCCGCCCGC ACGCGCGGCG TTCGCCTCAC TCGGCGCGAC GGTGATCGGC
GTGCCGGTCG ACGCGCACGG CCTCGTAACC GAGCGACTGC CCGACGACGC GCGTCTCGTC
TACGTGACGC CGTCGCACCA GTTTCCGCTC GGGATGCCGA TGACGCTGGA CCGTCGTGTC
GCGCTGCTCG AATGGGCGCA GCGCCGCCGC GCGGTGATCA TCGAGGACGA CTACGACGGC
GAGTTCCGCT TCGAAGGCCG GCCGGTGGAG TCGCTGAAGA GCCTCGACCG CACGGGCCTC
GTCGCGTACG TCGGCACGTT CTCGAAGACG ATCTTCCCCG AACTGCGGAT CGGCTACGCG
ATTCCGCCGC GCGCACTGCG CGGCGCGCTC GCGAAGGCGA AGCAGATCGT CGACTGGCAT
ACCTGCACGC TGACGCAGGC AGCGCTCGCC CGCTTCATGC TCGAAGGCGA TTTCGCGCGG
CACCTGCGGC GCGTGCAGAA GCACTACGAC GCGCGCCGCA AGATGCTGCT CGCGCACCTG
CGCGGCGGCC TCGCGCCGTG GTTCGACACG ATCGTGCCGA CCGCGGGCAT CCACCTCGCC
GCGCTCCTGA AACCCGGGCT CGACGAAGCC GCGCTGGTCC GCGCGGCCCG CGAGCACGAC
ATCGGCCTGT ACGGGATCTC GCCGTTCCAC GTCGGCTCGG CCGCGCGCGC GGGGTTGCTG
TTCGGCTATG GCGGAATCGA CGCGCTGCGC ATCGATACCG CGCTCGCGAA ACTGGCTGTG
CTGCTTCGTT CGGGCGATTT CGGCGGGCCC TCACTGGTTA CCTGA
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| Protein sequence | MDIAIRIEGR HDLTGQIFRQ LRTAIVDGRL EGGARLPSTR DLAKQLGVSR KTTLDAFERL
VAEGYLNTRA GDGTFVAGGL ARVPHAPVAS TPSLVEDTPR VHAVDARALW DDLPDALAMP
TPQASPAFDF RGGVTDKTLF PFDAWRRCLH HALRQQARGL GQYHDPAGDP QLRGAIARYV
GFSRAVACGW DDVLVTQGAQ QALDLIARVV VRPGDVVAVE NPGYPPARAA FASLGATVIG
VPVDAHGLVT ERLPDDARLV YVTPSHQFPL GMPMTLDRRV ALLEWAQRRR AVIIEDDYDG
EFRFEGRPVE SLKSLDRTGL VAYVGTFSKT IFPELRIGYA IPPRALRGAL AKAKQIVDWH
TCTLTQAALA RFMLEGDFAR HLRRVQKHYD ARRKMLLAHL RGGLAPWFDT IVPTAGIHLA
ALLKPGLDEA ALVRAAREHD IGLYGISPFH VGSAARAGLL FGYGGIDALR IDTALAKLAV
LLRSGDFGGP SLVT
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