Gene Bamb_3692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3692 
Symbol 
ID4312588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp543202 
End bp543936 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content68% 
IMG OID638151534 
ProductTetR family transcriptional regulator 
Protein accessionYP_775580 
Protein GI115358442 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.674174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAATTAA CTAACTCATC AATTAGCGTC GTCTGCATGA ACGCGAAATC CACCGTCGCC 
AGGCCGCGCG GGCGCCGCCC GTCGGTGGAA GACTTCGACC TGCGCGATCA CATGCTCGAC
GTGGCGATCC AGCTGTTCGC CGAGCACGGC ATCGCCGCGA CGACGGTCGC GCAGATCGCC
GCGGCCGCCG GCGTCACGTC GGCGATGGTC CACTACTACT TCACGAATCG CGAGCAACTG
CTCGACGCGA TCGTCGAGGA GCGGCTCGCG CAGGTCATCG CGTTCGTGTG GCGGCCGACC
GCGCCGCAGA TCGAAAACGA TCCGTTCGCG CTCGTCGCCG AGCTCGTCGA CCGGTTCTTC
GACGTCACGC ATCGCATGCC GTGGCTGCCG TCGATCTGGC TGCGCGAGAT CGTCCACGAA
GGCGGGCTGC TGCGCGAGCG GATGGTCCGC CGCATTCCGC TCGAGCATGT CGGGCGTTTT
GCCGAACGCA TCCGCGCCGC GCAGCAGGCC GGCACGCTGA ACCCGTCACT CGAACCCGCC
TTCCTGTTCC ATTCGATCAT CGCGCTCGTC ATGCTGCCGC TCGCGACCGC GAAGCTGTGG
CAAAGCGCGC GCGGCCTGCC GCCGATCGAT CGCGACGTGC TGCATCGCCA CGTCCGCGCG
CTGCTCGGCT CCGGCATGCA GCCGCCCGTC ACCGCACCGG ATGCGCACTC GCGCGCGCCA
CGGAGGCCGT CGTGA
 
Protein sequence
MKLTNSSISV VCMNAKSTVA RPRGRRPSVE DFDLRDHMLD VAIQLFAEHG IAATTVAQIA 
AAAGVTSAMV HYYFTNREQL LDAIVEERLA QVIAFVWRPT APQIENDPFA LVAELVDRFF
DVTHRMPWLP SIWLREIVHE GGLLRERMVR RIPLEHVGRF AERIRAAQQA GTLNPSLEPA
FLFHSIIALV MLPLATAKLW QSARGLPPID RDVLHRHVRA LLGSGMQPPV TAPDAHSRAP
RRPS