| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3674 |
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| Symbol | |
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| ID | 4312570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 521906 |
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| End bp | 522862 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638151516 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_775562 |
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| Protein GI | 115358424 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.798447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.880422 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGA CCCGACGTCA CTTCCTCGCG CAAGCAAGCG CTCTCGCCAC CACCTTCACC
GTCGCGCCGG CCGCGCTCCA TGCGCAATCG GGCGCGCGGC CGCTGCTGCG GGCCGGCGAC
CAGAAAGGCG GGCTGCGCGC GCTGCTCGAA GCGGCCGGCG AGCTGAACGG CCTTGCGTAC
GACATCGCGT GGACCGAATT CCCGGCCGCC GCGCCGCTGG CCGAAGCGCT GAACGCGGGG
GCCGTGGACT GCGGCCCGAT CGGCGACGCG CCGGTGATCT TCGCGCTCGC GTCGGGCGCC
CGCATCAAGG TGATCGCCGC GAACCGCTCC GACCCGTACG GCACCGCCGT GCTCGTGCGG
CCCGACGCCA CGCTGAAAGC CGCCGCCGAT CTGAAAGGCA AGCGCATCGG CACCACGCGC
GGCTCGATCG GCCATTTCGT CACGCTGAAG GCACTCGACG CGGCCGGCTT GCCACCGGAC
GCCGTATCGT TCCGCTTCCT GCCGCCGGCC GACACGATGC TTGCGCTCGC AACCGGATCG
ATTGATGCGT GGGCGACCTG GGAGCCGTAT ACGGCGCTCG CCGAAACGAG CGGCCGCGCG
CGCGTGCTCG TCGACGGCCG CGGCCTGTGG TCGGGCCTCA GCTACGTCGC GGCAACCGAC
GCGGCGATCG CGTCGAAGCG CGACGTGTTG CGCGACTTCC TGCAACGTGT CGTGCGCGCG
CAGGTCTGGT CGTACCGGCA CGTCGACGCG TATTCCGCGG CGCTCGCGCG CATCATCGGC
ATCCCGCCGG CGGCCGCGAA GCTGCAGTTC GAGCGCCGCA ACACGCGCTG GCAGCCGATC
GACGCGACGG TGATCGCCGC ACAGCAGCGC ACGGCCGACT TCTATCTGAA AGCCGGGCTG
CTGCGCCAGC CGCTGGACGT GCGCACGACG TTCGACCTCG GCTTTGCGCT CGCGTAA
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| Protein sequence | MNPTRRHFLA QASALATTFT VAPAALHAQS GARPLLRAGD QKGGLRALLE AAGELNGLAY
DIAWTEFPAA APLAEALNAG AVDCGPIGDA PVIFALASGA RIKVIAANRS DPYGTAVLVR
PDATLKAAAD LKGKRIGTTR GSIGHFVTLK ALDAAGLPPD AVSFRFLPPA DTMLALATGS
IDAWATWEPY TALAETSGRA RVLVDGRGLW SGLSYVAATD AAIASKRDVL RDFLQRVVRA
QVWSYRHVDA YSAALARIIG IPPAAAKLQF ERRNTRWQPI DATVIAAQQR TADFYLKAGL
LRQPLDVRTT FDLGFALA
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