Gene Bamb_3611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3611 
Symbol 
ID4312507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp444452 
End bp445681 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content66% 
IMG OID638151453 
Product3-oxoacyl-(acyl carrier protein) synthase II 
Protein accessionYP_775499 
Protein GI115358361 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCG TGGTCGTGAC GGGAATGGGC GGTGTGACCG CGTTTGGTCA ACGCTGGACG 
GAGATCGAAG CGCGCTTGCG CGACGGGCGC AACGCGGTGC GGCGCATGCC GGAATGGGAC
TGCTTCGAGG CGCTGCATAC GCGGCTTGCG TGTCCGTTGC CGGCGTTCGA GCTGCCACCC
ACGTATCCGC GCAAGAAGAC GCGTTCGATG GGGCCGGTGT CGATGTACGC GGTGCGCGCG
AGCGAACTGG CGCTGGAGGA TGCGGGGTTG TCCGACGATG CATCGATCCG TGACGGCCGG
ATGGGCGTCG CGTACGGATC GTCGTCTGGA TCGGTCGAAC CGATCCGGGC ATTCGGCACG
ATGCTCGAAA CGGGCTCGAT GCGCGACGTC ACGTCGAACA GCTACGTGCA GATGATGCCG
CATACCACGG CCGTCAACGT CAGCCTGTTC TGGGATCTGA AAGGCCGGAT CGTGCCGACG
TCGTCCGCAT GCGCGTCCGG CAGCCAGGCG ATCGGCTACG CGTACGAAGC GATTGCGACG
GGCAAGCAAG CGCTGATGCT GGCGGGCGGC GCGGAAGAAT TGTCGGGCCC GGCGGTGGCC
GTGTTCGATA CCCTGTACGC AACCAGTACG CGCAACGATG CCGCGCACCT GACGCCACGC
CCGTTCGACG CCGATCGCGA CGGTCTGGTA GTCGGCGAGG GCGCGGCGAC GCTGGTGCTC
GAGGAGTACG AGCACGCGCT CGCGCGCGGT GCAACGATCC ATGCGGAGAT CGTCGGCTTC
GGCTGCAACT CCGACGGCGC GCACATTACC CAGCCGACCG CCGAGACGAT GGCGGTCGCC
ATGCGTCTCG CGCTGAGCGA TGCGACGCTC GACGCAGACG CGATCGGCTA CGTGAACGCG
CACGGTACGT CGACCGATCG CGGCGACGTA GCGGAGAGTC ATGCGACGGC GTCGGTGTTC
GGCGAACGCA TGCCGATCAG TTCGCTGAAA AGCTATGTGG GTCACACGCT CGGCGCGTGC
GGCGCACTCG AGGCATGGTG GACGATCGAA ATGATGAAGC GCAACTGGTA TGCGCCGACG
CTCAATCTCA CCAAGGTCGA TCCGGCGTGC GCGCCGCTCG ACTACATCAT CGGCGACGCA
CGCCGGATCG ATGCGGAATT CGTGATGAGC AACAACTTCG CGTTCGGCGG GATCAACACG
TCGTTGATCT TCCGCCGGAT CGGCGCATGA
 
Protein sequence
MKRVVVTGMG GVTAFGQRWT EIEARLRDGR NAVRRMPEWD CFEALHTRLA CPLPAFELPP 
TYPRKKTRSM GPVSMYAVRA SELALEDAGL SDDASIRDGR MGVAYGSSSG SVEPIRAFGT
MLETGSMRDV TSNSYVQMMP HTTAVNVSLF WDLKGRIVPT SSACASGSQA IGYAYEAIAT
GKQALMLAGG AEELSGPAVA VFDTLYATST RNDAAHLTPR PFDADRDGLV VGEGAATLVL
EEYEHALARG ATIHAEIVGF GCNSDGAHIT QPTAETMAVA MRLALSDATL DADAIGYVNA
HGTSTDRGDV AESHATASVF GERMPISSLK SYVGHTLGAC GALEAWWTIE MMKRNWYAPT
LNLTKVDPAC APLDYIIGDA RRIDAEFVMS NNFAFGGINT SLIFRRIGA