Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3575 |
Symbol | |
ID | 4312471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 400469 |
End bp | 401296 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638151417 |
Product | peptidase M55, D-aminopeptidase |
Protein accession | YP_775463 |
Protein GI | 115358325 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2362] D-aminopeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00281601 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.133258 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGATCC TGATTTCCAC CGACATCGAA GGTGTCGCCG GTGTGTTCGC CGTCGAGCAG ACGCGGGCCG GCAATCCGGA GTACGAACGT GCGCGCCGCT GGATGACCGC CGAGGCGAAC GCGGCGATCG AAGGTGCATT CGCGGGCGGC GCGCAGACCG TCTGGGTCAA CGACTCGCAT GGCAGCTTTC GCAATCTGCT GCCCGACGGG CTCGATGCGC GTGCGCGCGT CGTGCTCGGC AAGCCGCGCA CGCTCGGGAT GATGGCGGGC CTCGAACAGC AACCCGATCT CGTGTTCATG ATCGGCTTTC ACGCGAAATC GCAGACGCAC GGCGTGCTCG CGCACACGAT CAACAATTTT GCATTCACGC AGGTGTGGCT GAACGGCGTC GAACTCGGCG AGGCCGGGCT GTACGGCGCG CTGGCGCGCG AATATGGCGC GCACGTCGCG CTGGCGTCGG GCGACGACGT GTTTGCGGAG GAAACCCGGC CGCTGTTTCC GGACGCGCGT TTCGAGACGG TCAAGACGGC CCGCGGCGCA TCGAGCGGCG ACACGCTCAC GCCGGCCGCG TCCTGCGCAC GCATCGCGAC CGCCGCACGC GAAACGGTCG CGCACGCGCT GTTGTCCGGC TGGCGCGCAA CCGCGCATCG GCCCGCGCCG GCCGCTTGCA CGTTGCGCGT GCAGACGGCC GCGCTCGCCG ATCTGTTCTG CATGCTGCCG ACGCTCGAGC GCGTCGATGC GGTGACGTTG CGCTTCGACG GCCCGTCGGT CGAGCACGTG GTGCGCACGT TGAACAGCCT GTCGGCCATG TCGTTCATGC TGCGGTGA
|
Protein sequence | MKILISTDIE GVAGVFAVEQ TRAGNPEYER ARRWMTAEAN AAIEGAFAGG AQTVWVNDSH GSFRNLLPDG LDARARVVLG KPRTLGMMAG LEQQPDLVFM IGFHAKSQTH GVLAHTINNF AFTQVWLNGV ELGEAGLYGA LAREYGAHVA LASGDDVFAE ETRPLFPDAR FETVKTARGA SSGDTLTPAA SCARIATAAR ETVAHALLSG WRATAHRPAP AACTLRVQTA ALADLFCMLP TLERVDAVTL RFDGPSVEHV VRTLNSLSAM SFMLR
|
| |