Gene Bamb_3547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3547 
Symbol 
ID4312443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp368810 
End bp369832 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content70% 
IMG OID638151389 
Productmalate/L-lactate dehydrogenase 
Protein accessionYP_775435 
Protein GI115358297 
COG category[C] Energy production and conversion 
COG ID[COG2055] Malate/L-lactate dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.312581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGT CGCTCGCCGA AGTCGTCCTG TCGCTCGATG AGGTCCACGC ACTCGCGCTG 
CGGGTGCTGA CGCACAACGG GATGTCCGCC GCGCACGCGC AGGCGATCGC GAACGTGATC
ACGCAGGGCC AGCGCGACGA ATGCCACTCG CACGGCGTGT ACCGGCTGCT CGTCTGCGTG
CGCTCGCTGA AGAAGGGCAA GGTCGATCCG CAGGCCGTGC CGACGCTGCG CCGGCTGTCG
TCGTCGATCG TCGCGGTCGA CGCGCATCGC GGCTTCTCGC TGCTCAGCTT CGAAACCGGC
CTGCCGGTGC TCGTCGAGAT GGCGAAGCAG CACGGGATCG CGGCGATGGC GATCAACCAT
TGCTACCACT TCTCGGCGCT GTGGCCCGAG GTCGAGGCGA TCGCCGCCGA GGGGCTGGTC
GGCATCGCGA TGAACCCGAG CCACAGCTGG GTCGCGCCGG AGGGCGGCCG CGAACCGGTG
TTCGGCACGA ACCCGATCGC GTTCGCGTGG CCGCGCCCGG ACGGCGTGCC GTTCGTGTTC
GACTTCGCGA CCAGCGCGAT CGCGCGCGGC GACATCGAGC TGCACGCAAA ACAGGGCAAG
GCGATCCCGC CGCACTGGGC GATCGATGCC GACGGCCAGC CGACCACCGA TCCGAAGGCC
GCGCTGCAGG GCGCGATGCG CACCTTCGGC GGCCACAAGG GCTCGGCGCT GGCAGCCATG
GTCGAGCTGC TCGGCGGCGC GCTGATCGGC GACATGACGA GCCGCGAGTC GATGGCCTTC
GACGAAGGCG TCGGCGCGAC GCCGTGCCAT GGAGAGCTCG TGATCGCGTT CGACCCGAAG
GTGTTCCTCG GCGACGAACT CGACGCGGGC CTCGCGCGCG GCGAGCGGAT GTTCGCGTCG
ATCACGGGGC AAGGCGCGCG GCTGCCGTCG CAGCGGCGCT TCGATGCCCG CGCGCGCAGC
ATCGCGCACG GCGTGCGGAT TCCGAAGGCG CTGTACGACG AAATCCTCAC GCTGCTCGAT
TGA
 
Protein sequence
MSESLAEVVL SLDEVHALAL RVLTHNGMSA AHAQAIANVI TQGQRDECHS HGVYRLLVCV 
RSLKKGKVDP QAVPTLRRLS SSIVAVDAHR GFSLLSFETG LPVLVEMAKQ HGIAAMAINH
CYHFSALWPE VEAIAAEGLV GIAMNPSHSW VAPEGGREPV FGTNPIAFAW PRPDGVPFVF
DFATSAIARG DIELHAKQGK AIPPHWAIDA DGQPTTDPKA ALQGAMRTFG GHKGSALAAM
VELLGGALIG DMTSRESMAF DEGVGATPCH GELVIAFDPK VFLGDELDAG LARGERMFAS
ITGQGARLPS QRRFDARARS IAHGVRIPKA LYDEILTLLD