| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3471 |
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| Symbol | |
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| ID | 4312367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 269202 |
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| End bp | 270053 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638151313 |
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| Product | virulence protein, SciE type |
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| Protein accession | YP_775359 |
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| Protein GI | 115358221 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4455] Protein of avirulence locus involved in temperature-dependent protein secretion |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.710904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.687 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATGC CATTTGCAGC CGAAGAACCG TCTGGCCACG GCCGTGACGA TGTGCCGATC
GCCGCGCAGA TCGAGCGGAT CGAGTCGCAT ATTCGTGCGC AGCCGACCTT CGCCGCCCAT
CGGTGGGCGC TGTTCCAGTG GCTGTGCGTA ACAGGCGACT GGGCACGCGC CGTGATTCAA
CTGCAGACGT GGGCAAAGCT TGAGCCGCAA CAAACGCAGG CCGCCCAGGT TTATCGTGAC
CTGGTCCGGG CCGAGCGCTG GCGACAGAAG GTTGTCGCGG GATTCGAACG CCCTGGGTTC
GTCCTCGAAC CGGCTCCGTG GGTCATGGAA CTGGCATTCG CACTGCGACT TGCTCGCGAC
GGGCAACGCG GACACGCCGA CGAAGCGCGA GAAAAAGCAC TCGACGCGGC GCCGCTCATC
GCAGCGCACA CGCCCCGGGG GGGCGCGAGC TGGATCGCCG ACAGCGATTC GCGTTTCGGA
CCGGTGTGCG AAGTCATGAC GGCCGGACAC TACCGCTGGG TACCGTTCGC CGATCTCGCC
GCGTGGCGCA TGGCCCCGCC TGCGAACCTC ATCGATCTCG TCTGGGCGTC GTGTGTGCTG
ACACTGACCG ACGGCAGTAC CGTGCACGGC TTCATGCCTG CCCGCTACCC CGGCTCGGAG
GCCGCGACCG ATGCACTGCG TCTGGGGCGC GAAACGGCCT GGCATGAGGC TGGACGTACC
GCCGTCATCG CGCACGGACA AAAAACCTGG ACAACGGATC GGGGCGATTT CGGTCTATTC
GAACTGGCCC ACGCGCAGTT CGGCTCGCGT GTTGCGGACG GCGCCACCAC CGGAGAGCCG
GTCGATGACT GA
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| Protein sequence | MKMPFAAEEP SGHGRDDVPI AAQIERIESH IRAQPTFAAH RWALFQWLCV TGDWARAVIQ
LQTWAKLEPQ QTQAAQVYRD LVRAERWRQK VVAGFERPGF VLEPAPWVME LAFALRLARD
GQRGHADEAR EKALDAAPLI AAHTPRGGAS WIADSDSRFG PVCEVMTAGH YRWVPFADLA
AWRMAPPANL IDLVWASCVL TLTDGSTVHG FMPARYPGSE AATDALRLGR ETAWHEAGRT
AVIAHGQKTW TTDRGDFGLF ELAHAQFGSR VADGATTGEP VDD
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