Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3437 |
Symbol | |
ID | 4312172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 232692 |
End bp | 233864 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638151279 |
Product | LysR family transcriptional regulator |
Protein accession | YP_775325 |
Protein GI | 115358187 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0826083 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0701512 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGACG CACCGGAGCC GCACGGCCTG CCCGTCGACG CGCCCGACGC CACGGGCGCG CTCGACGTAC TGGACGCGCG GCTGATGCGC ATCCTGCTCG TGCTGCTCAC CGAGCGCACC GTGTCGCGCG CGGCCGTGCG GCTGAACATG TCGCAGCCGG CGACGAGCGC GGCGCTCAAG CGGCTGCGCA CGCTGCTCGG CGATCCGCTG CTGGTGCGCA GCCGCTACGG CATGGTGCCG ACCGAGTTCG GCGCGCGGCT GATCGACCCG CTGCGCAATG CGCTGCGCGT GATCGACTTC ATCCGCATCC AGCAACCGAC CTTCGACGCG CGCACCTCCG TGCGCACCTA CCGGATCGGC TGCCCCGATT ATCTGAACGT GCTGTTCGTG CCGAAGCTCG TCGCGCTGTT CCGCGCACGC GCGCCGAATG CGCAGCTCGT GTTCCATCCG CTCGGCGACG GCTACGACGA CGAACGTGCG CTCGCTGATG GCGAGCTCGA CATCGTGATC GACAATCGCC CTGCCCGTTC GTCGCGGTTC CGGCAGGACG ATCTGTTCGA CGATCGCATC GTGTGCCTGA TGCGCGCGAC GCATCCGCTC GCGCGGCGCG GCGCGATGAC GGCCGCCGAA TTCGCGCAGG CGGCGCAGCT GTGCCCGACG CCGTCGTGGC TCGAAGCGTC CGGCGCGATC GATCTGCAGC TCGAACGCGT CGGCCTGCAG CGGCGGATCG TCGTCACGCT TCCGCATTTC GAGCTCGCCG CGCATGCGCT CGTGCGCTCC GATCTGATCC TGACCACCAC GTATCGACTC GCGCGCCACT ACGCGAAGCT GCTGCCGCTC GGCGCGGTCG CGCTGCCGGC CGAGCCGCCC GACATCGTGT ACCGGATGAC GTGGAACGAG TCGGGGCCGT GCGTCGACGG CGTGCGGTGG CTGCGCGCGC TGATTGCCGA AGCGACGCAC GGCTGGCTCG ATGCGGAGGC TGCGCTGCCG GACGTCACGG CGGTGGCCGC GAACGTGGGC GCGGACGCGC GAACGGCTGC GCCGGTGGCC GACGAGCCGC CCGAACCCGC GCGACGCACC CGCCGGCGGC AGGCGACGCA TTGCGGCAGC TCGCAGCGGC CGCACCCCGC GCGCGCGGCG CGCATCCATC GCATCGCGAC GAAGTCGCAC TGA
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Protein sequence | MRDAPEPHGL PVDAPDATGA LDVLDARLMR ILLVLLTERT VSRAAVRLNM SQPATSAALK RLRTLLGDPL LVRSRYGMVP TEFGARLIDP LRNALRVIDF IRIQQPTFDA RTSVRTYRIG CPDYLNVLFV PKLVALFRAR APNAQLVFHP LGDGYDDERA LADGELDIVI DNRPARSSRF RQDDLFDDRI VCLMRATHPL ARRGAMTAAE FAQAAQLCPT PSWLEASGAI DLQLERVGLQ RRIVVTLPHF ELAAHALVRS DLILTTTYRL ARHYAKLLPL GAVALPAEPP DIVYRMTWNE SGPCVDGVRW LRALIAEATH GWLDAEAALP DVTAVAANVG ADARTAAPVA DEPPEPARRT RRRQATHCGS SQRPHPARAA RIHRIATKSH
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