Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3386 |
Symbol | |
ID | 4312246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 184052 |
End bp | 184948 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638151228 |
Product | glucose-1-phosphate thymidylyltransferase |
Protein accession | YP_775274 |
Protein GI | 115358136 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.718729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACAG CGATTGGCCG TAAAGGACTG ATTCTGGCGG GCGGCTCGGG CACCCGGCTC CATCCGCTCA CGCACTCGGT GTCGAAGCAA TTGATGCCGG TGTACGACAA ACCGATGATC TATTACCCGC TCAGCACGAT CATGCTGTCG GGCATCCGCG ACGTGCTGGT CATCTCGACG CCGCGCGATC TCGATGCCTT CCAGCAACTG CTCGGCGACG GCAGCCAGTG GGGCATGAAC TTTTCGTATG CGGCGCAGCC GAGCCCCGAC GGTCTTGCCC AGGCGTTCGT GATCGGCGCG CCGTTCATCG GTCGCGACGC GGCGACGCTC GTGCTCGGCG ACAACATCTA TCACGGGCCC GCGCTGTCGT CGCTGCTGCA ACAAGCCGCC GCACGGACCG CCGGCGCGAC CGTGTTCGGC TACTACGTGC GCGATCCGGA GCGCTACGGC GTCGTGTCGT TCGACGCGCA TGGCCGGGCG ATCGACCTCG AGGAAAAACC GCGCGAGCCG AAGTCGCACT ATGCGGTCAC CGGCCTCTAT TTCTACGACA ACGACGTCGT CGAATTGGCG AAGGCCGTGC GACCGTCCGC GCGCGGCGAA CTGGAAATTA CCGACCTGAA TCTCGCGTAT CTCGCGCGCG GCGCGCTGAA TGTCGAGATA CTCGGGCGCG GCTACGCATG GCTCGACACC GGCACGCACG AATCGTTGCT CGACGCGGCC AATTTCATCC AGGTAATGCA GGCGCGGCAG GGCCTGCAAA TCGCGTGTCC CGAGGAAATC GCGTACCGGC TCGGCTGGAT CGATGCGGAG CAGCTCGAAA CGCTCGCGCA CAAGCTCGCG AAAAGCGGTT ACGGCCGCTA TCTGCTCGAT CTGCTGAGCA AGGAGGTCGC AGCATGA
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Protein sequence | MQTAIGRKGL ILAGGSGTRL HPLTHSVSKQ LMPVYDKPMI YYPLSTIMLS GIRDVLVIST PRDLDAFQQL LGDGSQWGMN FSYAAQPSPD GLAQAFVIGA PFIGRDAATL VLGDNIYHGP ALSSLLQQAA ARTAGATVFG YYVRDPERYG VVSFDAHGRA IDLEEKPREP KSHYAVTGLY FYDNDVVELA KAVRPSARGE LEITDLNLAY LARGALNVEI LGRGYAWLDT GTHESLLDAA NFIQVMQARQ GLQIACPEEI AYRLGWIDAE QLETLAHKLA KSGYGRYLLD LLSKEVAA
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