Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3356 |
Symbol | |
ID | 4312358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 149673 |
End bp | 150905 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638151198 |
Product | O-succinylhomoserine sulfhydrylase |
Protein accession | YP_775245 |
Protein GI | 115358107 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCGCG GCGCGCCCTT CGAATACGGA AAACGGAACA TGGACGACTC CCTCAATTTC GACACGCTCG CCGTGCGCGC GGGCACGCTG CGCAGCAGCG ACTTCAACGA GCACTCGGAA GCGCTGTTCC TCACGTCGAG CTTCTGCTTC AAGAGCGCGG CCGAGGCCGC CGAGCGCTTC GCGAATTCGG AAGACTATTT CACCTATTCG CGCTTCACGA ACCCGACCGT CACCATGTTC CAGGATCGTC TCGCCGCGCT CGAAGGCGGC GAGGCCTGCA TTGCGACGGC GTCGGGCATG GCCGCGATCA TGTCGGTCGT GATGTCGGCA CTCCAGGCAG GCGATCACCT CGTCAGCTCG CGCAGCCTGT TCGGCTCGAC GCTCGGGATG TTCTCGCAGA TCTTCAGTAA GTTCGGCATC ACGACGACCT TCGTCGACCC GACCGACCTG AACGCGTGGC AGGAAGCGGT GCGGCCCGAA ACGAAGATGT TCTTCCTCGA AACGCCGTCG AACCCGCTGA CCGAGCTCGC CGACATCGAG GCGATCGGCA AGATCGCGAA GGCGGCGAAC GCGCTGTTCG TCGTCGACAA CTGTTTCTGC AGCCCGGTGC TGCAGCAGCC GCTGAAGCTC GGCGCGGACG TCGTGATGCA CTCGGCGACG AAGTTCCTCG ACGGGCAGGG CCGCGTGCTC GGCGGCGCGC TGGTCGGCTC GAAGGCATTC ATCATGGGCA AGGTGTTCCC GTTCGTGCGC AGCGCGGGCC CGACGTTGTC GGCGTTCAAC GCGTGGGTGC TGCTGAAGGG GATGGAGACG CTGTCGCTGC GCGTCGAGAA GCAGTCGGCG AACGCGCTGG AAATCGCGCG CTGGCTCGAT TCGCATCCGG CCGTCGCGCG CGTCTTCTAT CCGGGGCTCG AGTCGCACCC GCAGCATGAG CTCGCGAAGC GCCAGCAGAA GGCGGGCGGC GCGATCGTCT CGTTCGAGCT GAAGGGCGAC ACGCCGGAGC AGCAGCGCGC GAACGCGTGG CGCGTGATCG ACAGCACGAA GCTGATCTCG ATCACCGGCA ACCTCGGCGA CACGCGCACG ACGATCACGC ATCCGGCGAC GACGACGCAC GCGCGCATCA CGCCGGAAGC GCGAGCGGCC GCGGACATCA CCGAAGGGCT GCTCCGCCTC GCGGTCGGCC TGGAGGATGC GGGCGACCTG CGCCGCGATC TCACGCGCGG CCTCGAGGGC TGA
|
Protein sequence | MIRGAPFEYG KRNMDDSLNF DTLAVRAGTL RSSDFNEHSE ALFLTSSFCF KSAAEAAERF ANSEDYFTYS RFTNPTVTMF QDRLAALEGG EACIATASGM AAIMSVVMSA LQAGDHLVSS RSLFGSTLGM FSQIFSKFGI TTTFVDPTDL NAWQEAVRPE TKMFFLETPS NPLTELADIE AIGKIAKAAN ALFVVDNCFC SPVLQQPLKL GADVVMHSAT KFLDGQGRVL GGALVGSKAF IMGKVFPFVR SAGPTLSAFN AWVLLKGMET LSLRVEKQSA NALEIARWLD SHPAVARVFY PGLESHPQHE LAKRQQKAGG AIVSFELKGD TPEQQRANAW RVIDSTKLIS ITGNLGDTRT TITHPATTTH ARITPEARAA ADITEGLLRL AVGLEDAGDL RRDLTRGLEG
|
| |