Gene Bamb_3312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3312 
Symbol 
ID4312314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp103576 
End bp103944 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content62% 
IMG OID638151154 
Productsuccinate dehydrogenase, cytochrome b subunit 
Protein accessionYP_775201 
Protein GI115358063 
COG category[C] Energy production and conversion 
COG ID[COG2142] Succinate dehydrogenase, hydrophobic anchor subunit 
TIGRFAM ID[TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.713417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.657196 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCCA ATAACCGAAT CGGCTCGAAG CGCCTCGTCG TCGGCGCTCA CTACGGCCTG 
CGCGACTGGC TCGCGCAGCG CGTCACCGCC ACGATCATGG CAGTCTACAC GGTCATTCTG
CTCGCGCTGT TCTTCGGCGC GCATGACTTC TCGTACGAAG GCTGGGCGTC GATCTTCTCC
GCGCAATGGA TGAAGCTCGC GACCTTCGTG ACGCTGCTTT CCCTCTTCTA CCACGCATGG
GTCGGCGTGC GCGACATCTG GATGGACTAC GTGAAGCCCG TCGGTGTGCG CCTGCTGCTG
CAATCGCTGA CCATCGTCTG GCTGCTCGCA TGTGCGGGCT ACGCCGCGCA GATTCTCTGG
AGAGTGTAA
 
Protein sequence
MAANNRIGSK RLVVGAHYGL RDWLAQRVTA TIMAVYTVIL LALFFGAHDF SYEGWASIFS 
AQWMKLATFV TLLSLFYHAW VGVRDIWMDY VKPVGVRLLL QSLTIVWLLA CAGYAAQILW
RV