Gene Bamb_3265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3265 
Symbol 
ID4312124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp49604 
End bp50224 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content57% 
IMG OID638151107 
ProductTetR family transcriptional regulator 
Protein accessionYP_775154 
Protein GI115358016 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.111309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.286417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATTG TCAGACAGGC TCAGCAGGAA CGAAGCGAGC AGACGCGAGC AGAAATTCTG 
GCCATTGCAC TCGAGCAGTT TTCGACTCGC GGCTTCGATG CGGTGAGCGT GCGCGATATC
GCCGATGTGG CCGGCGTCAA TCACGCGATG ATTCGTTACT ACTTCGGCAG CAAGGACAAT
CTGTGGCGGG AAAGCGTGAC CTTCCTCTTC GACCGCTTCA TGGAAGAGGC GAAGCCACCG
GGGTCGGATG TAGGACGCAT CTCGCTCGAT GTCGTGAAGG AGTACATCCG GAACTACGTC
CGGTATTGCG CGAAGTATCC GGAGCACGCA CGCCTGATGA TGCAGGAAGC CAATCGCGAT
TCCGAACGAT TGAAATGGAT GGCACAGACG TTCATTCGGC CACGCCACAA CCTCACCATT
CCGCTGATCG AGCATGTGAG CGCACAGACG AAGGGGCTCG AAAAGATCGA TCCCATTACG
CTCCTGTACA TGATCACCGC GATCGCGCAA ATCCCGTATC TGCTGACCGC TGAAATCAAA
TACGCGCACG GCATCAACGC GCTGCGGGAG AAGGCCGTGG AAGCCCATTG CGAAGCCGTG
CTGGCGTTCG TCTTTCGCTG A
 
Protein sequence
MQIVRQAQQE RSEQTRAEIL AIALEQFSTR GFDAVSVRDI ADVAGVNHAM IRYYFGSKDN 
LWRESVTFLF DRFMEEAKPP GSDVGRISLD VVKEYIRNYV RYCAKYPEHA RLMMQEANRD
SERLKWMAQT FIRPRHNLTI PLIEHVSAQT KGLEKIDPIT LLYMITAIAQ IPYLLTAEIK
YAHGINALRE KAVEAHCEAV LAFVFR