Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3256 |
Symbol | dnaG |
ID | 4312222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 37642 |
End bp | 39510 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638151097 |
Product | DNA primase |
Protein accession | YP_775145 |
Protein GI | 115358007 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0530643 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTCCGC ATTCGTTCCT GCAGGATTTA CTGAACCGCG TCGATATCGT CGACGTGGTG GGCCGGTACG TGCAGCTCAA GAAGGGCGGC GCCAACTTCA TGGGGCTGTG CCCGTTCCAT AACGAGAAGA GCCCGTCGTT TACCGTGAGC CCGACCAAGC AGTTCTATCA CTGCTTCGGC TGCGGCGCGC ACGGCACGGC GATCGGCTTC CTGATGGAGC ACGCGGGGCT CACGTTCCCG GAAGCCGTGC AGGAACTCGC GCAATCGGTC GGGCTGACCG TGCCGCACGA GCCGTCGATG CGCGGCGGCG GTGGGGGCGG CGGCGACTAT CCGGCACCCG TGTCCAAATC GGTCGCGACG GCGCTGTCCG ACGTGATGTC CGTCGCGTGC GACTACTATC GCAAGCAGTT GCGCGGCGCG ACCGTCGCGA TCCAGTACCT GAAGAACCGG GGCCTGACCG GCGAGATCGC CGCGCGCTTC GGCCTCGGCT ATGCGCCGGA CGGCTGGCAG AACCTCGAAA CCGCGTTCCC CGACTATCGC GACGAATCGC TCGTCGAATC GGGGCTCGTG ATCGTCAGCG AAAAAACCGA CGCGCAAGGC GTCGCCCGCC GTTACGACCG GTTCCGCGAG CGGATCATGT TCCCGATCCG CAACGTGAAG GGGCAGGTGA TCGGGTTCGG CGGCCGCGTG CTCGGCAGCG GCGAGCCGAA GTACCTGAAT TCGCCCGAAA CGCCGCTGTT CAACAAGGGC AGCGAACTGT ACGGGCTGTT CGAGGCGCGC CTCGCGATCC GCGAGCGCAA GTACGTGCTG GTCGTCGAGG GCTACATGGA CGTCGTCGCG CTCGCGCAGC TCGGCTTCCC GAACGCGGTC GCGACGCTCG GCACGGCGTG CACGCCGATC CACGTGCAGA AGCTGCTGCG CCAGACCGAT ACGGTCATTT TCAGCTTCGA CGGCGACTCG GCCGGCCGGC GTGCGGCGCG CCGCGCGCTC GAGGCGTGCC TGCCGCATGC GGCGGACAAC CGGACGATCC GATTCCTTTT CCTGCCGTCC GAACATGATC CGGACAGCTA CGTACGCGAA TTCGGCGCGG AAGCGTTCTC CGAGCAGGTC GAACGCGCGA TGCCGCTGTC GCAATTTCTG TTGAACGAAG CAATTGCCGG CAAGGCGCTC GATCAACCGG AAGGTCGCGC GAAGGCGCTG TTCGACGCGA AGCCGCTGCT GCAGGCGCTG CCTGCTAATG CGTTGCGTGC GCAAATCATG CACATGTTCG CCGACCGTCT CGATATTCCG TTCGAGGAAG TCGCGGCGCT GTCGGATGTC GATGCACGCA TTGCCGCGCC GGCGCGCCAC GCGCCCCCGC GCAGCGAGCG GCGACGCGTG ACGGACAGCG AAAAGCGGGC GTTGCGTACG CTCGTGATGC ATCCGCGGAT CGCGTCGCAG CTCGACGACG AGCAACTTGC GACCCTGCGC GCGCTGCCGC GCATCGGCGA GCTGTTCGCC GAAGTCGTCG AGCATGCGCG TGCACTCGGC GACGGCGCGG AGTTCCGGCT GCTGTCGGAC GTGCTGCGCA CCTCCTCGAA CGGGGCGACT TACGAGGAAA TCTTCCGCGA AATTCTGGAC TATGATGAAA ACGTCCGCGA CTTGCTGTTA CAGAATCCGG AAGACGAGAC GGTGCCCGAG CGGCAGCGCG AACAGGAGCG GATCGCGGGC GAGGAACTGC AGGCCGCGGT GCTCAAGATG CGTTACGACG CATGCTGCGA CCGGCTCGAT CGGCTGGCGC GGCAATCCAC CTTCACACCC GAGGAACTGG CCGAATTGAC GGAATTGAAC CAGCAGCGAA CCGACATGAA GCGTCGGCTC GGGCTGTAG
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Protein sequence | MIPHSFLQDL LNRVDIVDVV GRYVQLKKGG ANFMGLCPFH NEKSPSFTVS PTKQFYHCFG CGAHGTAIGF LMEHAGLTFP EAVQELAQSV GLTVPHEPSM RGGGGGGGDY PAPVSKSVAT ALSDVMSVAC DYYRKQLRGA TVAIQYLKNR GLTGEIAARF GLGYAPDGWQ NLETAFPDYR DESLVESGLV IVSEKTDAQG VARRYDRFRE RIMFPIRNVK GQVIGFGGRV LGSGEPKYLN SPETPLFNKG SELYGLFEAR LAIRERKYVL VVEGYMDVVA LAQLGFPNAV ATLGTACTPI HVQKLLRQTD TVIFSFDGDS AGRRAARRAL EACLPHAADN RTIRFLFLPS EHDPDSYVRE FGAEAFSEQV ERAMPLSQFL LNEAIAGKAL DQPEGRAKAL FDAKPLLQAL PANALRAQIM HMFADRLDIP FEEVAALSDV DARIAAPARH APPRSERRRV TDSEKRALRT LVMHPRIASQ LDDEQLATLR ALPRIGELFA EVVEHARALG DGAEFRLLSD VLRTSSNGAT YEEIFREILD YDENVRDLLL QNPEDETVPE RQREQERIAG EELQAAVLKM RYDACCDRLD RLARQSTFTP EELAELTELN QQRTDMKRRL GL
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