Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3246 |
Symbol | |
ID | 4312212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 27648 |
End bp | 28517 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638151087 |
Product | 3-mercaptopyruvate sulfurtransferase |
Protein accession | YP_775135 |
Protein GI | 115357997 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2897] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0068458 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCACACA CCCACTACAC CACGCTCATT TCCGCAGCCA ATCTCGCCGA ACGTCTGGCC GCGGCGCCGG GCAGCGTCGC CGTATTCGAC TGCCGCTTCG ATCTCGCCGA TCCGGTCGCG GGCGAAGCCG CCTATGCAGC CGGGCACATC CCCGGCGCGC AGTATCTTCA TCTCGACCGC GACCTGTCCG GCCGCAAGAC CGGCACCAAC GGCCGCCATC CGCTACCGAC CCGCGACGCA TTCGCGACGC TGATGGCCAG CCGCGGCGTC AAGCAGGGCC AGCAGGTGGT CGCGTATGAC GCACACGGCG GCGCCTATGC GGCGCGCCTG TGGTGGCTGC TGCGCTGGCT CGGGCACGAC TCCATCGCGG TGCTCGACGG CGGCCTGCAG GCATGGGAAG CGGCCGGCCA GCCGTTGACC ACCGACGTGC CGCACCCGCC CGCCGGCGAC TTCCGGGCAG CAGCGCCGCT CGAATCGACG GTCGACGCGG CAGCCGTGCT CGCGAACGTG ACGTCGGCCC AGCGCGTCGT GATCGATGCG CGCGCGCCCG ATCGCTATCG CGGAGAAAAC GAAACGATCG ATCGTGTCGG CGGCCACATT CCCGGCGCAC GCAACCGGTT CTTCAAGGAC AACCTGAACG CCGACGGCCG CTTCAAGACC GGCCACGAAC TGCGCGAGAC GTTCACCACG CTGCTGGCCG GCACCGAACC GAACAGCGTG ATCCTGCAAT GCGGCTCCGG CGTAACCGCA TGCCACAACG CGCTCGCACT CGAAGTCGCG GGGTTGCATG GCGCATCGCT GTATCCGGGC TCGTGGAGCG AATGGAGCGC CGATCCGTCG CGGCCGATCG CGACCGGCCC GACGCCGTAA
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Protein sequence | MPHTHYTTLI SAANLAERLA AAPGSVAVFD CRFDLADPVA GEAAYAAGHI PGAQYLHLDR DLSGRKTGTN GRHPLPTRDA FATLMASRGV KQGQQVVAYD AHGGAYAARL WWLLRWLGHD SIAVLDGGLQ AWEAAGQPLT TDVPHPPAGD FRAAAPLEST VDAAAVLANV TSAQRVVIDA RAPDRYRGEN ETIDRVGGHI PGARNRFFKD NLNADGRFKT GHELRETFTT LLAGTEPNSV ILQCGSGVTA CHNALALEVA GLHGASLYPG SWSEWSADPS RPIATGPTP
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