Gene Bamb_3246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3246 
Symbol 
ID4312212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp27648 
End bp28517 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content69% 
IMG OID638151087 
Product3-mercaptopyruvate sulfurtransferase 
Protein accessionYP_775135 
Protein GI115357997 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2897] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0068458 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCACACA CCCACTACAC CACGCTCATT TCCGCAGCCA ATCTCGCCGA ACGTCTGGCC 
GCGGCGCCGG GCAGCGTCGC CGTATTCGAC TGCCGCTTCG ATCTCGCCGA TCCGGTCGCG
GGCGAAGCCG CCTATGCAGC CGGGCACATC CCCGGCGCGC AGTATCTTCA TCTCGACCGC
GACCTGTCCG GCCGCAAGAC CGGCACCAAC GGCCGCCATC CGCTACCGAC CCGCGACGCA
TTCGCGACGC TGATGGCCAG CCGCGGCGTC AAGCAGGGCC AGCAGGTGGT CGCGTATGAC
GCACACGGCG GCGCCTATGC GGCGCGCCTG TGGTGGCTGC TGCGCTGGCT CGGGCACGAC
TCCATCGCGG TGCTCGACGG CGGCCTGCAG GCATGGGAAG CGGCCGGCCA GCCGTTGACC
ACCGACGTGC CGCACCCGCC CGCCGGCGAC TTCCGGGCAG CAGCGCCGCT CGAATCGACG
GTCGACGCGG CAGCCGTGCT CGCGAACGTG ACGTCGGCCC AGCGCGTCGT GATCGATGCG
CGCGCGCCCG ATCGCTATCG CGGAGAAAAC GAAACGATCG ATCGTGTCGG CGGCCACATT
CCCGGCGCAC GCAACCGGTT CTTCAAGGAC AACCTGAACG CCGACGGCCG CTTCAAGACC
GGCCACGAAC TGCGCGAGAC GTTCACCACG CTGCTGGCCG GCACCGAACC GAACAGCGTG
ATCCTGCAAT GCGGCTCCGG CGTAACCGCA TGCCACAACG CGCTCGCACT CGAAGTCGCG
GGGTTGCATG GCGCATCGCT GTATCCGGGC TCGTGGAGCG AATGGAGCGC CGATCCGTCG
CGGCCGATCG CGACCGGCCC GACGCCGTAA
 
Protein sequence
MPHTHYTTLI SAANLAERLA AAPGSVAVFD CRFDLADPVA GEAAYAAGHI PGAQYLHLDR 
DLSGRKTGTN GRHPLPTRDA FATLMASRGV KQGQQVVAYD AHGGAYAARL WWLLRWLGHD
SIAVLDGGLQ AWEAAGQPLT TDVPHPPAGD FRAAAPLEST VDAAAVLANV TSAQRVVIDA
RAPDRYRGEN ETIDRVGGHI PGARNRFFKD NLNADGRFKT GHELRETFTT LLAGTEPNSV
ILQCGSGVTA CHNALALEVA GLHGASLYPG SWSEWSADPS RPIATGPTP