Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3230 |
Symbol | |
ID | 4312285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 10771 |
End bp | 11880 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638151072 |
Product | PHB depolymerase family esterase |
Protein accession | YP_775120 |
Protein GI | 115357982 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
TIGRFAM ID | [TIGR01840] esterase, PHB depolymerase family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.891696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.152859 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAAA GTCTGACGAA GGTATGGCTG GGGGGCGTGA AACGCATGCT GTCCCCGGCT GCCAAACGTG GGGCGCGCGA TGCACAGCGG ATCGCGCGCG ATACGCTCGA GGCCGCGGCC TCGAGCGCCG CTACCGATCT GTCCCCGCCG CGCGAGTCGC GCGTGCGGCC GCGCGCGGCT GCATGGGCGG CAGGCGAGTG GACGCGTGGC GAGCATCCAA TGGCGCCCGC GCTCGGCCGC CTCGTCCAGC AGCTCGCATA CGGGCTTTAT GTCCCGCCCG GCCGGCGGCG CGGCGCGATG CCGCTCGTCG TGATGCTGCA CGGTTGCCAG CAATCGGTCG ACGAGTTTGC GCAGGGCACG CGAATGAACC TGCTGGCCGA CAAGCACGGC TTCGCCGTGC TGTATCCGGA GCAGTCGCAG CGTGCGCACG CGCACGGCTG CTGGCACTGG TATGAGGATA CCGATCGCGC GGGTCGTGGC GAAGCGGATA CGGTCGCGTC GCTGATTGAT GCGTTGGTTG ACGAGCACGG TTTCGACGCA TCGCGCGTCT ACGTCGCGGG GTTGTCGGCC GGCGCGGGGC TGGCGGCGCT GCTCGCACTG CACCATCCGG ATCACTTCGC GGCGGTCGCG CTGCACTCGG GCCCCGCCCT CGGCGAGGCG AATTCCGGCA TCAGTGCGAT GGACGTGATG CGGCGCGGGC TGCGGGAGAA CCCGGCGGCC GTGCTCGATG CGCTGATCGA CGCCAGTGCG TATCCGGGCA TGCCCGCGCT GATCGTGCAG GGTGACGCCG ACCATGTCGT CGCGCCGAAG AATGCGGACC AGCTCACGGT GCAGTTCATG CGCCTGAACG GGCTCGCGGA TAGCCGCGGC GCACTGCGCG GCGGCGATCG CGTGGAGACG CGCGAGGCGG GCGCGCACAT CACCGACGTG CGCCGCGACG GGGAGCCGGT CGTGCGGCTT TGCCACGTCA AGGGGCTCGA TCATGCGTGG GCCGGCGGCG ACGAAGCCGT ACCGTTTCAT GCGGCGGTTG GCCCCGATGC GAGCGCGATG ATCTGGTCCT TTTTCGAACA GAATCGTCGC ACTGTGGCGA CCGAACGACG CACCGTCTGA
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Protein sequence | MTKSLTKVWL GGVKRMLSPA AKRGARDAQR IARDTLEAAA SSAATDLSPP RESRVRPRAA AWAAGEWTRG EHPMAPALGR LVQQLAYGLY VPPGRRRGAM PLVVMLHGCQ QSVDEFAQGT RMNLLADKHG FAVLYPEQSQ RAHAHGCWHW YEDTDRAGRG EADTVASLID ALVDEHGFDA SRVYVAGLSA GAGLAALLAL HHPDHFAAVA LHSGPALGEA NSGISAMDVM RRGLRENPAA VLDALIDASA YPGMPALIVQ GDADHVVAPK NADQLTVQFM RLNGLADSRG ALRGGDRVET REAGAHITDV RRDGEPVVRL CHVKGLDHAW AGGDEAVPFH AAVGPDASAM IWSFFEQNRR TVATERRTV
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