Gene Bamb_3223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3223 
Symbol 
ID4312278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp4212 
End bp4595 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content63% 
IMG OID638151065 
Product4-oxalocrotonate tautomerase 
Protein accessionYP_775113 
Protein GI115357975 
COG category 
COG ID 
TIGRFAM ID[TIGR00013] 4-oxalocrotonate tautomerase family enzyme 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.858973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTCA CCCGAATCGC AGTGCGCGAA GGCAAACCGG CCGCCTACCG CGCGGCGCTC 
GTCGACGGCG TGCATCGCGC GCTGATGCAC ACGTTCAACG TGCCCGAGGA CGACATCTTC
ATGGTCGTGA CCGAGCACTC GGCCGAGAAC TTCGTGTTCG GCCGCCACTA TTTCGACATC
GAACGCAGCG ACGATCTCGT GATGATCCAG ATCACCGCGA ACAACACGCG CACGCTCGAG
CAGAAACGGG CGCTGTACCG GACCATCACC GAGAACCTCG CGCGGCAGCC CGGCGTGCGG
CAGCAGGACG TGTTCATCAG TCTCGTGGAA GTGCTGAAGG AGGACTGGTC GTTCGGCAAC
GGGATCGCGC AATACGCCGT TTGA
 
Protein sequence
MPFTRIAVRE GKPAAYRAAL VDGVHRALMH TFNVPEDDIF MVVTEHSAEN FVFGRHYFDI 
ERSDDLVMIQ ITANNTRTLE QKRALYRTIT ENLARQPGVR QQDVFISLVE VLKEDWSFGN
GIAQYAV