| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3215 |
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| Symbol | |
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| ID | 4310491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 3553701 |
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| End bp | 3555365 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638151057 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_775105 |
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| Protein GI | 115353266 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.15042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATCA AACGCACCGT CCTATGGGTG ATCTTCTTCA TGTCAGCTGT CATGCTGTAC
GACAACTGGC AGCGCTCCCA TGGACGCCCG TCGATGTTCT TCCCGAGCGC CACGCAGACG
GCCCCCGCCG CTGCCGGCGG CGCATCGGGC ACGGGCGCGA CGACGACGAC CGCAGGTGAA
GTGCCTGCCG CCGCGGCGGG CACCGCACCG TCGACGACGG CACCGGCCGC GCAGGCGCAG
CTCGTGAAGT TCTCGACCGA CGTCTATGAC GGCGAAATCG ACACGCGCGG CGGCACGCTG
GCGAAGCTGA CGCTGAAGAA GCAGGGCGAC GGCAAGCAGC CGGACCTGTA CATCACGCTG
TTCGACCACA CGGCCGGCCA CACGTACCTC GCGCGCACGG GCCTGCTCGG CGGCGACTTC
CCGAACCACA ACGACGTCTA CACGCAGGTC AATGCGGGCC CGACGTCGCT GACGGGCGAC
CAGAACGCGC TGAAGCTGTC GTTCGAATCG CCGGTGAAGG GCGGCGTGAA GGTCGTGAAG
ACCTACACGT TCACGCGCGG CAGCTACGTG ATCGGCGTCG ACACCAAGAT CGACAACGTC
GGCACGGCAC CGGTCACGCC GACGGTCTAC ATGGAACTGG TGCGCGACAA CACGGCCGTC
GAAACGCCGA TGTTCTCGCA TACGTTCCTC GGGCCGGCGG TCTACACGGA CGCGAAGCAC
TTCCAGAAGA TCGATTTCAG CGATCTCGAC AAGAACAAGG CGAACTTCGA GAAGGCGGCC
GACAACGGCT GGGTCGCGAT GGTGCAGCAC TACTTCGCGT CGGCCTGGAT TCCGCAGCAG
GGCGCGAAGC GCGACATCTA CGCTGAAAAG ATCGATCCGG CGCTGTATCG CGTCGGCGTG
AAGCAGCCGG TCGCCGCGAT CGCTCCGGGC CAGTCGGCCG ACGTGCAGGC GCGCCTGTTC
GCCGGTCCGG AAGAAGAGCG CATGCTCGAA GGCATCGCGC CGGGCCTGGA ACTCGTGAAG
GACTACGGCT GGGTGACGAT CATCGCGAAG CCGCTGTTCT GGCTGCTCGA GAAGATCCAC
GGCTTCGTCG GCAACTGGGG CTGGGCGATC GTGCTGCTGA CGGTGCTGAT CAAGGCCGTG
TTCTTCCCGC TGTCGGCCGC GAGCTACAAG TCGATGGCGC GCATGAAGGA AATCACGCCG
CGCATGCAGG CGCTGCGCGA ACGCTTCAAG AGCGATCCGC AGAAGATGAA CTCGGCGCTG
ATGGAGCTGT ACAAGACCGA GAAGGTCAAT CCGTTCGGCG GCTGCCTGCC GGTCGTGATC
CAGATCCCGG TGTTCATCTC GCTGTACTGG GTGCTGCTCG CATCGGTCGA AATGCGCGGT
GCGCCGTGGA TTCTGTGGAT TCACGACCTG TCGCAGCGCG ATCCGTTCTT CATCCTGCCG
GTGCTGATGG CCGTCTCGAT GTTCGTGCAG ACGAGCCTGA ACCCGACGCC GCCGGACCCG
GTCCAGGCGA AGATGATGAA GTTCATGCCG ATCGCGTTCT CGGTGATGTT CTTCTTCTTC
CCGGCTGGCC TGGTGCTGTA CTACGTCGTG AACAACGTGC TGTCGATCGC GCAGCAGTAC
TACATCACGC GCAAGCTCGG CGGGGTTAAG AAGAAGCCGG CCTGA
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| Protein sequence | MDIKRTVLWV IFFMSAVMLY DNWQRSHGRP SMFFPSATQT APAAAGGASG TGATTTTAGE
VPAAAAGTAP STTAPAAQAQ LVKFSTDVYD GEIDTRGGTL AKLTLKKQGD GKQPDLYITL
FDHTAGHTYL ARTGLLGGDF PNHNDVYTQV NAGPTSLTGD QNALKLSFES PVKGGVKVVK
TYTFTRGSYV IGVDTKIDNV GTAPVTPTVY MELVRDNTAV ETPMFSHTFL GPAVYTDAKH
FQKIDFSDLD KNKANFEKAA DNGWVAMVQH YFASAWIPQQ GAKRDIYAEK IDPALYRVGV
KQPVAAIAPG QSADVQARLF AGPEEERMLE GIAPGLELVK DYGWVTIIAK PLFWLLEKIH
GFVGNWGWAI VLLTVLIKAV FFPLSAASYK SMARMKEITP RMQALRERFK SDPQKMNSAL
MELYKTEKVN PFGGCLPVVI QIPVFISLYW VLLASVEMRG APWILWIHDL SQRDPFFILP
VLMAVSMFVQ TSLNPTPPDP VQAKMMKFMP IAFSVMFFFF PAGLVLYYVV NNVLSIAQQY
YITRKLGGVK KKPA
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