Gene Bamb_3175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3175 
Symbol 
ID4310451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp3509517 
End bp3510218 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content67% 
IMG OID638151016 
Productresponse regulator receiver protein 
Protein accessionYP_775065 
Protein GI115353226 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.320814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACCA TCCTGGTGGT AGATGATGAA ATGGGCATCC GGGAATTGCT CTCGGAAATC 
CTCAGCGATG AAGGACATGT CGTCGAGGCG GCGGAGAACG CGCAGGCCGC GCGGGAATAC
CGTCTGAATC AGGCGCCCGA TCTCGTGCTG CTCGATATCT GGATGCCCGA TACCGACGGC
GTCACGCTGC TCAAGGAATG GGCGGCGCAG GGCCTGTTGA CGATGCCCGT GATCATGATG
TCCGGGCACG CGACGATCGA CACGGCCGTC GAGGCAACAA AGATCGGCGC GCTCGATTTC
CTCGAGAAGC CGATCGCGCT GCAGAAGCTG CTGAAGTCAG TCGAGCACGG TCTCGTGCGC
GGCGCGGCAC CGGTGTCCGT CAACGCGGCG GCGAAGGCCG GCGTCGGGCA GGCTTCGGGC
CCGGCGGCGG TCGCGTCCGC GGCCGCGCTG CCGACGCTCG GCGACGACAT GGCCGCGGCG
CTCGGTCTCG CAGGCCAGAC GGCCGCGATT CCGTTCGACA TCCCGTTGCG CGAAGCGCGC
GATGCGTTCG AGCGCGCGTA CTTCGAATAT CACCTCGCGC GCGAGAACGG CAGCATGACG
CGCGTCGCGG AGAAGACGGG CCTCGAGCGC ACGCACCTGT ATCGCAAGCT CAAGCAGCTG
GGCGTCGAGC TCGGCAAGAA GCCGTCGGAA GGCGCCGCGT AA
 
Protein sequence
MATILVVDDE MGIRELLSEI LSDEGHVVEA AENAQAAREY RLNQAPDLVL LDIWMPDTDG 
VTLLKEWAAQ GLLTMPVIMM SGHATIDTAV EATKIGALDF LEKPIALQKL LKSVEHGLVR
GAAPVSVNAA AKAGVGQASG PAAVASAAAL PTLGDDMAAA LGLAGQTAAI PFDIPLREAR
DAFERAYFEY HLARENGSMT RVAEKTGLER THLYRKLKQL GVELGKKPSE GAA