| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3148 |
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| Symbol | |
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| ID | 4310630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 3465349 |
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| End bp | 3466599 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638150988 |
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| Product | HlyD family type I secretion membrane fusion protein |
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| Protein accession | YP_775038 |
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| Protein GI | 115353199 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGGC GCATTCGATC GATGCCGGGC CGCGGAACGG CGCCGCGCCT GCGAGCCGGC
GATGCCGCCT ACATGAGCGA CATTCGCGAA GCGCTGCTCG TGCGCTCGTC CGCGGGTGCG
CAGCTGATTC TCTATCTGAT CGCAATCGTG CTCGGCGCCG GCCTGGTGTG GGCGCACTTC
GCTCGCGTCG AGGAGGTCAC GCGCAGCGAA GCGACGGTCG TATCGCCGAG CCGCGAACAA
TTGATTCAGA GTCTCGAGGG CGGCATCGTC CAGAGCGTGG CGGTGCGCGA GGGCGAGGTG
GTCGAAAAAG GGCAGTTGCT CGCGAAGATC GATCCGGCAC GCGCGCAATC GAGCTATCGC
GAAGTGTTGA CCAAGGCGCT GGAGCTCAAG GCGAGCGTGT CACGCGCGCG TGCCGAAGCC
TATGGGGTGC CGCTGGACTT TCCGGAAGAC GTGAAGCGCG AATCCGGCCT CGTCGCGCAG
GCCACCGCAA CCTACCGTGC CCGCCGCCGC GCGCTCGACG AGCAGGTCAC CGCGCTGGAG
AAGAGCCAGG CGCTGGTCCG GCGCGAGATC GCGATGTCGG AGCCGCTCGC GGCGAAGGGG
CTGGTCTCGG AAGTCGAGAT CCTGCGCATG CGGCGTCAGT CGACGGACAT CGCCGCGCAG
ATCGCCGAGC GCCGGAGCCG TTTCACCGCG GAGGCCAGTA CCGAGCTGTC GCGGCTCGAA
CAGGAGCTCG CCCAAACCAA CGAAGTGCTG GCCGGGCGCG CGGACGTGCT GGCGCGCACC
GATGTCGTCG CGCCGATGCG CGGCGTGGTG AAGAACATCC GCATCCGCAC CGCGGGTGGT
GTCGTGCAGT CGGGCGAACA CATCATGGAG ATTGCGCCGC TCGACGGCCG CGTGCTGGTC
GAAGCGCGGA TCAAGCCATC CGACGTCGCG TTCCTGCGGC CGGGGTTGCC GGTGCTCGTG
AAGCTGAGCG CGTACGACTT CTCGATCTAC GGCGGATTGC ACGGGCACGT TGTCAGCCTC
GGTCCGGACA CGTTGAAGGA TGATCAGAAG GCCGCGATGG GGCGTCCCGA CGCGAACTAT
TACCGGCTCA TGGTCGAGAC GGACTCGGAC GCGCTCGCCG CGGCCGGCAA GCGTCTGCCG
GTATTGCCGG GCATGCAGGC AACGGTCGAT ATCCGCACCG GCGAGAAGAC GGTGCTCGAT
TACCTGCTCA AGCCGATCTT CAAGGCCCGC GAGGCCTTCA GGGAGCGTTG A
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| Protein sequence | MMRRIRSMPG RGTAPRLRAG DAAYMSDIRE ALLVRSSAGA QLILYLIAIV LGAGLVWAHF
ARVEEVTRSE ATVVSPSREQ LIQSLEGGIV QSVAVREGEV VEKGQLLAKI DPARAQSSYR
EVLTKALELK ASVSRARAEA YGVPLDFPED VKRESGLVAQ ATATYRARRR ALDEQVTALE
KSQALVRREI AMSEPLAAKG LVSEVEILRM RRQSTDIAAQ IAERRSRFTA EASTELSRLE
QELAQTNEVL AGRADVLART DVVAPMRGVV KNIRIRTAGG VVQSGEHIME IAPLDGRVLV
EARIKPSDVA FLRPGLPVLV KLSAYDFSIY GGLHGHVVSL GPDTLKDDQK AAMGRPDANY
YRLMVETDSD ALAAAGKRLP VLPGMQATVD IRTGEKTVLD YLLKPIFKAR EAFRER
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