Gene Bamb_3060 details

Gene Information

• Locus tag: Bamb_3060
• Symbol: flgK
• ID: 4310542
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: -
• Start bp: 3379301
• End bp: 3381298
• Gene Length: 1998 bp
• Protein Length: 665 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 638150900
• Product: flagellar hook-associated protein FlgK
• Protein accession: YP_774950
• Protein GI: 115353111
• COG category: [N] Cell motility
• COG ID: [COG1256] Flagellar hook-associated protein
• TIGRFAM ID: [TIGR02492] flagellar hook-associated protein FlgK

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.947345
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCAACA CACTCATGAA CCTCGGCGTC AGCGGCCTCA ATGCCGCGCT CTGGGGCCTC 
ACGACGACCG GTCAGAACAT CAGCAATGCC GCGACGCCCG GCTATTCGGT CGAGCGCCCC 
GTCTATGCCG AGGCAAGCGG CCAGTACACG TCGAGCGGCT ACATGCCGCA GGGCGTGAAC 
ACCGTCACCG TGCAGCGGCA GTACAGCCAG TACCTGAGCG ACCAGTTGAA CAGCGCGCAG 
TCGCAGGGCG GCGCGCTGTC GACGTGGTAT TCGCTCGTCG CGCAGCTGAA CAACTACGTC 
GGCAGCCCGA CGGCCGGCAT CTCGACCGCG ATCACCGGCT ATTTCACCGG GCTGCAGAAC 
GTCGCGAACA ATGCGTCCGA TCCGTCGGTG CGGCAGACCG CGATCAGCAA CGCGCAGGTG 
CTCGCCGATC AACTCAAGGC GGCCGGCCAG CAGTACGACG CGCTGCGCCA GAGCGTGAAC 
ACGCAGCTCA CCAGCACCGT GTCGCAGATC AACACGTACA CGTCGCAGAT CGCGCAACTG 
AACCAGCAGA TCGCGGCGGC GAGCAGCCAG GGGCAGCCGC CCAACCAGCT GATGGACCAG 
CGCGACCTCG CGGTGTCGAA CCTGTCGAGC CTCGCCGGCG TGCAGGTCGT GCGCAACGAC 
AGCGGCTACA GCGTGTTCCT CGCGGGCGGC CAGCCGCTCG TCGTCGCCGA CAAGAGCTAC 
CAGCTCGCGA CGGTCACGTC GCCGTCCGAT CCGAGCGAGC TGACCGTCGT GTCGCAAGGC 
ATCGCCGGCG CGAACCCGCC GGGCCCGAAC CAGGCGCTGC CGGACACGTC GCTGTCGGGC 
GGCACGCTCG GCGGCCTGCT CGCGTTCCGC AGCCAGACGC TCGACCCCGC GCAGGCGCAG 
CTCGGCGCGC TCGCCACCAG CTTCGCCGCG CAGGTCAACG GGCAGAACGC GCTCGGCATC 
GACCTGTCGG GCAAGCCGGG CGGCAACCTG TTCGCGGTGG CGAACCCGGC CGTCTATTCG 
AACCAGGGCA ATACCGGCAC CGCGTCGCTT TCCGTCTCGT TCGCCAACGC CGCGCAGCCG 
ACCACGAGCG ATTACACGCT GTCGTACGAC GGCACCAACT ACACGCTGAC CGACCGCGCG 
AGCGGGTCGG TGGTCGGCCA GTCGACGTCG ATGCCGGCGT CGATCGGCGG GCTGGCCTTC 
TCGTTCGCGT CGGGCTCGAT GAATGCCGGC GACCAGTTCA CCGTGCTGCC GACGCGCGGC 
GCGCTGAACG GCTTCGGCCT CGCGACGACG AGCGGTTCGG CGATCGCGGC CGCGTCGCCG 
GTGGTCGCGG CGGCGTCGAG CACCAACCTC GGCACGGGCA AGATCGCGCA GGGCGCGGTG 
AGCGCCGGCT ACCAGGTCCC GACCACGCCG ACCAAGCTCA CCTACGACGC GGCGTCGAAG 
TCGCTGTCGG GCTTCCAGGC CGGCACCACG GTGACGATCG CGGGCACGCC GCCCACCTCG 
GTGACGATCA CGAGCCCGAC CGACAGCGTG CCGTACGACG CGACGGCCGG CGCGAAGCTG 
ACGATCACGA GCACCACACA GCCGGCGCCG GCGGGCGTGA TGAACGGCGT GACCGTCACG 
CTGTCCGGCG CGCCGTCCGA CGGCGACTCC TTCACGATCG GACCGTACGC GGGCGGCACG 
AGCGACGGCT CCAACGCGCT CGCGCTGTCG CAGCTCGTCA CCGCGAAGTC GCTCGGCGGC 
GGCACGACGA CGCTGACCGG CGCATATGCG AAGTACGTGA ACGCGATCGG CAACACGGCG 
AGCCAGCTGA AGTCGTCGAG CGCCGCGCAG ACCTCGCTGG TCGGCCAGAT CACGACCGCG 
CAGCAGTCGG TGTCGGGCGT GAACCAGAAC GAGGAAGCGG CGAACCTGAT GCAGTACCAG 
CAGCTTTACC AGGCGAACGC GAAGGTGATC CAGACGGCGG CGACGCTGTT CCAGACCGTG 
CTCGGCCTGT TCAACTGA 

 

Protein sequence

MSNTLMNLGV SGLNAALWGL TTTGQNISNA ATPGYSVERP VYAEASGQYT SSGYMPQGVN 
TVTVQRQYSQ YLSDQLNSAQ SQGGALSTWY SLVAQLNNYV GSPTAGISTA ITGYFTGLQN 
VANNASDPSV RQTAISNAQV LADQLKAAGQ QYDALRQSVN TQLTSTVSQI NTYTSQIAQL 
NQQIAAASSQ GQPPNQLMDQ RDLAVSNLSS LAGVQVVRND SGYSVFLAGG QPLVVADKSY 
QLATVTSPSD PSELTVVSQG IAGANPPGPN QALPDTSLSG GTLGGLLAFR SQTLDPAQAQ 
LGALATSFAA QVNGQNALGI DLSGKPGGNL FAVANPAVYS NQGNTGTASL SVSFANAAQP 
TTSDYTLSYD GTNYTLTDRA SGSVVGQSTS MPASIGGLAF SFASGSMNAG DQFTVLPTRG 
ALNGFGLATT SGSAIAAASP VVAAASSTNL GTGKIAQGAV SAGYQVPTTP TKLTYDAASK 
SLSGFQAGTT VTIAGTPPTS VTITSPTDSV PYDATAGAKL TITSTTQPAP AGVMNGVTVT 
LSGAPSDGDS FTIGPYAGGT SDGSNALALS QLVTAKSLGG GTTTLTGAYA KYVNAIGNTA 
SQLKSSSAAQ TSLVGQITTA QQSVSGVNQN EEAANLMQYQ QLYQANAKVI QTAATLFQTV 
LGLFN