Gene Bamb_3053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3053 
Symbol 
ID4310535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp3372733 
End bp3373581 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content69% 
IMG OID638150893 
Producthypothetical protein 
Protein accessionYP_774943 
Protein GI115353104 
COG category[S] Function unknown 
COG ID[COG3619] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTCG ACGGCGCCAG CCGCAACCTC ACCGTCGCCG CGCTGCTCAC GCTGTCCGGC 
GGCTACCTCG ACGCATACAC GTACGTCGGT CACGGCCACG TGTTCGCGAA CACGATGACC
GGCAACGTCG CGCTGCTAGG CATCAACGTC TCGGCCGGCG AATGGGCGGA GGCGCTGCAT
CACGTGCCGC CGCTCGGCGG CTTCGTGGTC GCGGTATTCG TCGCGCACCT GTTCGGCCTT
GCCGCGCAGC GCGGCTGGAT GCGTCACACC GCGTTCGTGA GCCTGATCGT CGAGATCGCG
TTTCTCGGCC TCGCCGCGAG CGGGCTCGTC GGCGCGTCGA GCGCGTGGCT GATTCCCGGC
ATCTCGTTCG TCGCGACGCT GCAGACGCTG TCGTTCACCC ATCTCGAGGA ACTGTCGTAC
ACGTCGGTGA TGACGACCGG CAACCTGCGG CGCGCCGCGC AGAAGCTGTT CGTCGGGCTG
ATTCCGCGCT ACGACGTGCT CGCGCTGCAC GACTCGGCGC TGCTCGCGAC GATCAGCTTC
TGTTTCCTGG CCGGCGCGGT GATCGGCGGC TTCGTGACGC GGCTCGTGCC GGACGTCGCG
TTGTGGGGCG CGGTGCTGCT GCTCGTCGGT GCGTTCGCGG AGATCGTACG GCGGGCGCGG
CGGCGCGCGG GCGGTGAGGG TGATGCTGGC GCTGGCAGCA ACGGCGATGG TCGCGTTGGC
GGCAACGCCA GCAACGTCAG CACCGCCAGC ACCGCCAGCA CCGCCAGCAC CGCCAGCAAC
GTCAGCACCA GCAGCACCAG CAGCAATCCC CACGACCGCA CGCCACGCGA CGCAAACCCC
GCGCGTTAA
 
Protein sequence
MDLDGASRNL TVAALLTLSG GYLDAYTYVG HGHVFANTMT GNVALLGINV SAGEWAEALH 
HVPPLGGFVV AVFVAHLFGL AAQRGWMRHT AFVSLIVEIA FLGLAASGLV GASSAWLIPG
ISFVATLQTL SFTHLEELSY TSVMTTGNLR RAAQKLFVGL IPRYDVLALH DSALLATISF
CFLAGAVIGG FVTRLVPDVA LWGAVLLLVG AFAEIVRRAR RRAGGEGDAG AGSNGDGRVG
GNASNVSTAS TASTASTASN VSTSSTSSNP HDRTPRDANP AR