| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3052 |
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| Symbol | |
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| ID | 4310534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 3371437 |
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| End bp | 3372591 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638150892 |
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| Product | porin |
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| Protein accession | YP_774942 |
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| Protein GI | 115353103 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGGAG ACACCTACAA AAAGGGCAAG CTCATGAAGC AGACCACCCG ACTCGCAGCT
ATCGCAGGGG GCGCGGCGCT GGCCTTCGCC AGCCAGTACG CAGCAGCACA AAGCTCGGTC
ACGCTGTGGG GCGTCGCCGA CGCCAGCATC CGTTACCTGA CCAACGCAAA CGCGAAGAAC
GACGGCCTGC TGTCGATGGC CAACGGCGCG ATCACGAACA GCCGCTTCGG CATCTATGGC
ACGGAAGACC TCGGCGGCGG CCTGAAGGCC GTGTTCAACC TCGAAAGCGG CGTCAACCTG
CAGAATGGCG GATTCGCCGA CAGCGGCCGT CTGTTCAACC GCGCAGCGTA CGTCGGCCTG
CAGAGCCCGT ACGGCACGGT GACCCTCGGC CGCCAGAAGA CCCCGCTGTT CGACCTGCTC
GCGGACACCT ACGATCCGCT GACGGTCGGC AACTACCTCG AAAACGCGTG GCTGCCGGTC
GCGCTGGGTG GCGGCCTGTA TGCGGACAAC CAGATCAAGT ACACGGGCAA GTTCGCGGGC
CTGACCGCGA AGGCGATGTA CTCGACGGGC ACGAACTACG AATCGACCGG CGCCGGCGGC
TTCTCGGGCC AGATCCCGGG CTCGCTCGGC AAGGGCAATG CATGGGGCGT GTCGCTGTCG
TACGTGGCGG GGCCGCTGAG CATCGCGGCC GGCGCGCAGC AGAACAGCGA CAACTCCGCG
CGCAAGCAGA CGATCTACCA CGCGAACGTC GTGTACGCGT TCAGCAAGGC GAAGATCTAT
GCGGGCTACC TGCGCTCGAA GGACGACACC GGTTTCGTCG ACAGCCTGCT CGCGCAGCAG
TCGATCCCGG TCGCGAAGGG CACGGGCCGG ATCGACGATG GTCCGTTCGC GGGCGTGAGC
TGGCAGGTCA GCACGCCGCT GACGCTGACG GGTGCGTTCT ACTACGACCA CATGCGCAAC
GCGATGACCA CGAACGGCAC GCTCGCGAGC GGCAACCGCT ACGCGATCGT CGGCATCGCC
GAATATGCGC TGAGCAAGCG CACGGAAGTC TACGGCACCG TCGACTTCAA CAAGACGAAC
GGCGCGGCGA ACGTCGAGCT GCCGGGTCGC AGCAACCAGA CCGGCATCGC GATCGGCCTG
CGCAATATCT TCTGA
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| Protein sequence | MNGDTYKKGK LMKQTTRLAA IAGGAALAFA SQYAAAQSSV TLWGVADASI RYLTNANAKN
DGLLSMANGA ITNSRFGIYG TEDLGGGLKA VFNLESGVNL QNGGFADSGR LFNRAAYVGL
QSPYGTVTLG RQKTPLFDLL ADTYDPLTVG NYLENAWLPV ALGGGLYADN QIKYTGKFAG
LTAKAMYSTG TNYESTGAGG FSGQIPGSLG KGNAWGVSLS YVAGPLSIAA GAQQNSDNSA
RKQTIYHANV VYAFSKAKIY AGYLRSKDDT GFVDSLLAQQ SIPVAKGTGR IDDGPFAGVS
WQVSTPLTLT GAFYYDHMRN AMTTNGTLAS GNRYAIVGIA EYALSKRTEV YGTVDFNKTN
GAANVELPGR SNQTGIAIGL RNIF
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